RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NPR2P20594 1047 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 AGAP20933 346 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 FMO3P31513 532 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 GUCA1AP43080 201 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-230ENST00000491028 MRPS34P82930 218 aaKnown RBP16.39■□□□□ 0.21
MCF2L-230ENST00000491028 TGFBR3Q03167 851 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 LINC01590Q5TEZ4 76 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF627Q7L945 461 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 LUZP2Q86TE4 346 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 OR6K6Q8NGW6 343 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 KISS1RQ969F8 398 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-230ENST00000491028 TEAD3Q99594 435 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 NELFAQ9H3P2 528 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 TMEM38BQ9NVV0 291 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 HAO2Q9NYQ3 351 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 AASSQ9UDR5 926 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 LRCH1Q9Y2L9 728 aa16.39■□□□□ 0.21
MCF2L-230ENST00000491028 A0A1W2PPL8 197 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 HRGP04196 525 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 ITGA5P08648 1049 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 IGHV1-2P23083 117 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 ASCL1P50553 236 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 CXCR4P61073 352 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 CSNK2BP67870 215 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 HSF2Q03933 536 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 POU4F2Q12837 409 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 GGTLC2Q14390 218 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 C6orf141Q5SZD1 244 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF474Q6S9Z5 364 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-230ENST00000491028 C1orf162Q8NEQ5 155 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-230ENST00000491028 SLC26A10Q8NG04 563 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 OR51L1Q8NGJ5 315 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 ZNRF4Q8WWF5 429 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF837Q96EG3 531 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-230ENST00000491028 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 POLE4Q9NR33 117 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 ELOVL5Q9NYP7 299 aa16.38■□□□□ 0.21
MCF2L-230ENST00000491028 RPL36Q9Y3U8 105 aaKnown RBP16.38■□□□□ 0.21
MCF2L-230ENST00000491028 FAM171A2A8MVW0 826 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 MSR1P21757 451 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 GSTT1P30711 240 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 FOXG1P55316 489 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-230ENST00000491028 ARF1P84077 181 aaKnown RBP16.37■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF91Q05481 1191 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 KCNMB1Q16558 191 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 LAIR2Q6ISS4 152 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 XKRXQ6PP77 449 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF433Q8N7K0 673 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-230ENST00000491028 LILRB4Q8NHJ6 448 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 NABP1Q96AH0 204 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 ZMYND19Q96E35 227 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-230ENST00000491028 BOD1Q96IK1 185 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 SEC61A2Q9H9S3 476 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 PLCXD1Q9NUJ7 323 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 KCNG2Q9UJ96 466 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 SMG1Q96Q15 3661 aaKnown RBP16.37■□□□□ 0.21
MCF2L-230ENST00000491028 MYO7BQ6PIF6 2116 aa16.37■□□□□ 0.21
MCF2L-230ENST00000491028 NBASA2RRP1 2371 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 HLA-DQA2P01906 255 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 CCDC159P0C7I6 412 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 DBTP11182 482 aaKnown RBP16.36■□□□□ 0.21
MCF2L-230ENST00000491028 PSMB1P20618 241 aaKnown RBP16.36■□□□□ 0.21
MCF2L-230ENST00000491028 CDAP32320 146 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 MTNR1AP48039 350 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 NUDT6P53370 316 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 DBPQ10586 325 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-230ENST00000491028 SMN1Q16637 294 aaKnown RBP16.36■□□□□ 0.21
MCF2L-230ENST00000491028 FBXL19-AS1Q494R0 122 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 C9orf135Q5VTT2 229 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 ANKRD16Q6P6B7 361 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF813Q6ZN06 617 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 SLC22A24Q8N4F4 322 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF808Q8N4W9 903 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-230ENST00000491028 OR1K1Q8NGR3 316 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 CA5BP1Q8WTZ4 195 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 SIAEQ9HAT2 523 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 COMMD3-BMI1R4GMX3 469 aa16.36■□□□□ 0.21
MCF2L-230ENST00000491028 CIB4A0PJX0 185 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 IRGMA1A4Y4 181 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 SLC1A7O00341 560 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 LYZL6O75951 148 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 FARS2O95363 451 aaKnown RBP16.35■□□□□ 0.21
MCF2L-230ENST00000491028 TFP02787 698 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 OR8G3PP0DMU2 310 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 B4GALT1P15291 398 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 CD79BP40259 229 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 LSM6P62312 80 aaKnown RBP16.35■□□□□ 0.21
MCF2L-230ENST00000491028 RBM48Q5RL73 367 aaKnown RBP16.35■□□□□ 0.21
MCF2L-230ENST00000491028 SFRP5Q5T4F7 317 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 OR7E24Q6IFN5 339 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 CXorf67Q86X51 503 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-230ENST00000491028 TIGD4Q8IY51 512 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 C17orf78Q8N4C9 275 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 ZNF511Q8NB15 262 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 OR10H5Q8NGA6 315 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 C11orf40Q8WZ69 217 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 LRRC46Q96FV0 321 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 FOXN4Q96NZ1 517 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 INTS14Q96SY0 518 aa16.35■□□□□ 0.21
MCF2L-230ENST00000491028 CNN2Q99439 309 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms