RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ARHGEF39Q8N4T4 335 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 DTX3Q8N9I9 347 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 KLHDC9Q8NEP7 349 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 TIMD4Q96H15 378 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 INSM2Q96T92 566 aaPredicted RBP8.15□□□□□ -1.11
LSAMP-205ENST00000490035 TAF9BQ9HBM6 251 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 SLC25A19Q9HC21 320 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 THAP10Q9P2Z0 257 aaPredicted RBP8.15□□□□□ -1.11
LSAMP-205ENST00000490035 DNMT3BQ9UBC3 853 aaKnown RBP8.15□□□□□ -1.11
LSAMP-205ENST00000490035 KNL1Q8NG31 2342 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 TRABD2BA6NFA1 517 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 TFAP2AP05549 437 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CD27P26842 260 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SDHAP31040 664 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 BMI1P35226 326 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 RPL35P42766 123 aaKnown RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 BIDP55957 195 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 DMWDQ09019 674 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 ACOT7LQ6ZUV0 252 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 C1orf87Q8N0U7 546 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 OR51A4Q8NGJ6 313 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 EGLN2Q96KS0 407 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 UBQLN3Q9H347 655 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 RRP8O43159 456 aaKnown RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CSN1S1P47710 185 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SUMO3P55854 103 aaPredicted RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SELENBP1Q13228 472 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 FAM53BQ14153 422 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 TAF9Q16594 264 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 OR2AE1Q8NHA4 323 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 FAM213BQ8TBF2 198 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 HLA-CQ95604 372 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 MED18Q9BUE0 208 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 BCL2L10Q9HD36 194 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 ACOT8O14734 319 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 ST8SIA3O43173 380 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CLDN1O95832 211 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SOD1P00441 154 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 GYPBP06028 91 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 TEAD1P28347 426 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SSTR4P31391 388 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 MRPS34P82930 218 aaKnown RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 BAXQ07812 192 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SLC35G3Q8N808 338 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 UNC13CQ8NB66 2214 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 LINC00615Q96LM1 132 aaPredicted RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 PAPPA2Q9BXP8 1791 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 PCED1AQ9H1Q7 454 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CHST8Q9H2A9 424 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CHST11Q9NPF2 352 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 COPS3Q9UNS2 423 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 LGALS8O00214 317 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 TUSC2O75896 110 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 DHODHQ02127 395 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 ZP2Q05996 745 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 ZADH2Q8N4Q0 377 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 DCBLD2Q96PD2 775 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 OR6C1Q96RD1 312 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 TPSD1Q9BZJ3 242 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 LAT2Q9GZY6 243 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 RPL34P49207 117 aaKnown RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CDC20Q12834 499 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 PNLIPRP3Q17RR3 467 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CGB2Q6NT52 195 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 OR5T1Q8NG75 326 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 APH1BQ8WW43 257 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 LIPHQ8WWY8 451 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 UTP4Q969X6 686 aaKnown RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CMC2Q9NRP2 79 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 B3GALT5Q9Y2C3 310 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SIT1Q9Y3P8 196 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 DEGS1O15121 323 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 POU4F3Q15319 338 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 C1orf140Q5VVS0 124 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 LSRQ86X29 649 aaPredicted RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 LSMEM2Q8N112 164 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 POFUT1Q9H488 388 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 GFYI3L273 518 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 BET1O15155 118 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 B4GAT1O43505 415 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SIGLEC6O43699 453 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 CLDN2P57739 230 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 SORDQ00796 357 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 HTR4Q13639 388 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 FAM78AQ5JUQ0 283 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 GLYATL3Q5SZD4 288 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 IL20RBQ6UXL0 311 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 EMG1Q92979 244 aaKnown RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 HHIPQ96QV1 700 aa8.14□□□□□ -1.11
LSAMP-205ENST00000490035 C19orf53Q9UNZ5 99 aaPredicted RBP8.14□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF749O43361 778 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 S100A8P05109 93 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 F13BP05160 661 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 FBXO45P0C2W1 286 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 NPPBP16860 134 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 ITGB8P26012 769 aa8.13□□□□□ -1.11
LSAMP-205ENST00000490035 NKX2-5P52952 324 aaPredicted RBP8.13□□□□□ -1.11
LSAMP-205ENST00000490035 TOMM34Q15785 309 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms