RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 ZNF99A8MXY4 864 aaPredicted RBP11.77□□□□□ -0.53
TRAIP-210ENST00000489948 MSTNO14793 375 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 TNFAIP8O95379 198 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 LAP3P28838 519 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 MPGP29372 298 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 PYCR1P32322 319 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 CHN2P52757 468 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 NUDT6P53370 316 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 SLC35A2P78381 396 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 MRPS34P82930 218 aaKnown RBP11.77□□□□□ -0.53
TRAIP-210ENST00000489948 ROR2Q01974 943 aaKnown RBP11.77□□□□□ -0.53
TRAIP-210ENST00000489948 HSF2Q03933 536 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 RAB40BQ12829 278 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 PCK2Q16822 640 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 KLHL12Q53G59 568 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 BTLAQ7Z6A9 289 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 MRGPRGQ86SM5 289 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 GABRG1Q8N1C3 465 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 ZNF786Q8N393 782 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 OR6K6Q8NGW6 343 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 ZNRF4Q8WWF5 429 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 IPCEF1Q8WWN9 437 aaPredicted RBP11.77□□□□□ -0.53
TRAIP-210ENST00000489948 OTULINQ96BN8 352 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 CNN2Q99439 309 aaKnown RBP11.77□□□□□ -0.53
TRAIP-210ENST00000489948 JAM3Q9BX67 310 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 NELFAQ9H3P2 528 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 SRA1Q9HD15 236 aaKnown RBP11.77□□□□□ -0.53
TRAIP-210ENST00000489948 CCNB1IP1Q9NPC3 277 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 SCN3BQ9NY72 215 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 JKAMPQ9P055 326 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 PRSS50Q9UI38 385 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 PSORS1C1Q9UIG5 152 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 KCNG2Q9UJ96 466 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 SH3BGRL2Q9UJC5 107 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
TRAIP-210ENST00000489948 J3QRE1 110 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 DVL2O14641 736 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 XPNPEP2O43895 674 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 FAM20BO75063 409 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 KRT33AO76009 404 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 PRB1P04280 392 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 NPR2P20594 1047 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 ETFDHQ16134 617 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 CEACAM16Q2WEN9 425 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 C4orf17Q53FE4 359 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 KLHL22Q53GT1 634 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 TEX30Q5JUR7 227 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 TIGD4Q8IY51 512 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 C1orf162Q8NEQ5 155 aaPredicted RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 BPIFB6Q8NFQ5 453 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 NABP1Q96AH0 204 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 ZMYND19Q96E35 227 aaPredicted RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 RNFT2Q96EX2 444 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 SIGLEC11Q96RL6 698 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 MNTQ99583 582 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 FOXB1Q99853 325 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 WACQ9BTA9 647 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 DUSP21Q9H596 190 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 ADGRL4Q9HBW9 690 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 FGF20Q9NP95 211 aaPredicted RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 POLE4Q9NR33 117 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 TMEM38BQ9NVV0 291 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 MRPL22Q9NWU5 206 aaKnown RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 TAS2R16Q9NYV7 291 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 EXOGQ9Y2C4 368 aaKnown RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 MYRFQ9Y2G1 1151 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 COA3Q9Y2R0 106 aaPredicted RBP11.76□□□□□ -0.53
TRAIP-210ENST00000489948 TPRKBQ9Y3C4 175 aa11.76□□□□□ -0.53
TRAIP-210ENST00000489948 CCL21O00585 134 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 MRPS14O60783 128 aaKnown RBP11.75□□□□□ -0.53
TRAIP-210ENST00000489948 IGHV3-9P01782 118 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 IGHA1P01876 353 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 TFP02787 698 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 ITGA5P08648 1049 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 SBK2P0C263 348 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 MSR1P21757 451 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 CHRNB4P30926 498 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 LSM6P62312 80 aaKnown RBP11.75□□□□□ -0.53
TRAIP-210ENST00000489948 ACTC1P68032 377 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 ACTA1P68133 377 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 FAPQ12884 760 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 P2RY6Q15077 328 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 SLC16A9Q7RTY1 509 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 RELL2Q8NC24 303 aaPredicted RBP11.75□□□□□ -0.53
TRAIP-210ENST00000489948 OR51L1Q8NGJ5 315 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 NSMAFQ92636 917 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 LGALS12Q96DT0 336 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 ZNF837Q96EG3 531 aaPredicted RBP11.75□□□□□ -0.53
TRAIP-210ENST00000489948 INTS14Q96SY0 518 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 YIPF3Q9GZM5 350 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 INPP5EQ9NRR6 644 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 DIMT1Q9UNQ2 313 aaKnown RBP11.75□□□□□ -0.53
TRAIP-210ENST00000489948 PCDHGB1Q9Y5G3 927 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 PCNX1Q96RV3 2341 aa11.75□□□□□ -0.53
TRAIP-210ENST00000489948 ADGRG4Q8IZF6 3080 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms