RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 TMEM183AQ8IXX5 376 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 BBS5Q8N3I7 341 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 B3GNT7Q8NFL0 401 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 OR10G2Q8NGC3 310 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 OR1S2Q8NGQ3 325 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 OR2L8Q8NGY9 312 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 GIMAP1Q8WWP7 306 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 STMN2Q93045 179 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 SGK3Q96BR1 496 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 MED8Q96G25 268 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 DUS3LQ96G46 650 aaKnown RBP1.42□□□□□ -2.18
CPSF3-205ENST00000489629 CEP170P1Q96L14 293 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 RARRES2Q99969 163 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 ECSITQ9BQ95 431 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 PLA2G12AQ9BZM1 189 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 CDC42EP4Q9H3Q1 356 aaKnown RBP1.42□□□□□ -2.18
CPSF3-205ENST00000489629 CWH43Q9H720 699 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 WFDC1Q9HC57 220 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 CTPS2Q9NRF8 586 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 SLC2A8Q9NY64 477 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 PSMC3IPQ9P2W1 217 aaPredicted RBP1.42□□□□□ -2.18
CPSF3-205ENST00000489629 DEC1Q9P2X7 70 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 MARCOQ9UEW3 520 aaPredicted RBP1.42□□□□□ -2.18
CPSF3-205ENST00000489629 PCYOX1Q9UHG3 505 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 LSM7Q9UK45 103 aaKnown RBP1.42□□□□□ -2.18
CPSF3-205ENST00000489629 VANGL2Q9ULK5 521 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 CEMIPQ8WUJ3 1361 aa1.42□□□□□ -2.18
CPSF3-205ENST00000489629 NFASCO94856 1347 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 PCM1Q15154 2024 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 C11orf94C9JXX5 98 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 XKRYO14609 159 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CD5LO43866 347 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SOX15O60248 233 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CACNG3O60359 315 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 EIF3GO75821 320 aaKnown RBP eCLIP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CLPXO76031 633 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 ASGR1P07306 291 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 ANXA5P08758 320 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 MRPL3P09001 348 aaKnown RBP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 ZDHHC11BP0C7U3 371 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 OR8G3PP0DMU2 310 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SMIM10L1P0DMW3 83 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 GALP22466 123 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 TUBG1P23258 451 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 OMGP23515 440 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CHMLP26374 656 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 IFNA8P32881 189 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CXCL5P42830 114 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 NSG1P42857 185 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 RFX3P48380 749 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 RORCP51449 518 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 NCBP2P52298 156 aaKnown RBP eCLIP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 ACLYP53396 1101 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 UGT2B15P54855 530 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 GPX6P59796 221 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 RPS15P62841 145 aaKnown RBP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 RPS21P63220 83 aaKnown RBP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 MRPS22P82650 360 aaKnown RBP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 HMGCS1Q01581 520 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 ZNF92Q03936 586 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SMARCB1Q12824 385 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 RCN1Q15293 331 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SOHLH1Q5JUK2 328 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SLC8B1Q6J4K2 584 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CLEC2AQ6UVW9 174 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 LINC00173Q6ZV60 143 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 H2AFVQ71UI9 128 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 HSD17B11Q8NBQ5 300 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CCDC54Q8NEL0 328 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SPATA4Q8NEY3 305 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CCDC148Q8NFR7 591 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 OR52K2Q8NGK3 314 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 AGR3Q8TD06 166 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 ACTRT1Q8TDG2 376 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CD300LFQ8TDQ1 290 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SDR42E1Q8WUS8 393 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 PIBF1Q8WXW3 757 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 NRGNQ92686 78 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 TMEM54Q969K7 222 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 DNAJC19Q96DA6 116 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SMIM10Q96HG1 83 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 WFIKKN1Q96NZ8 548 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SH3GL3Q99963 347 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 OSBPL10Q9BXB5 764 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 GABARAPL3Q9BY60 117 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 FAM192AQ9GZU8 254 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 RACGAP1Q9H0H5 632 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 OR51M1Q9H341 326 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 ZNF160Q9HCG1 818 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 FGF20Q9NP95 211 aaPredicted RBP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 SLCO1B3Q9NPD5 702 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 TUBG2Q9NRH3 451 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 DDX18Q9NVP1 670 aaKnown RBP1.41□□□□□ -2.18
CPSF3-205ENST00000489629 RAB20Q9NX57 234 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 PTTG3PQ9NZH4 202 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 KIAA1257Q9ULG3 409 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 TMED5Q9Y3A6 229 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 CNTNAP1P78357 1384 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 TSPOAP1O95153 1857 aa1.41□□□□□ -2.18
CPSF3-205ENST00000489629 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms