RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CALCRP30988 508 aa15.05■□□□□ -0
MDC1-206ENST00000489540 CDAP32320 146 aa15.05■□□□□ -0
MDC1-206ENST00000489540 KRR1Q13601 381 aaKnown RBP15.05■□□□□ -0
MDC1-206ENST00000489540 SGCAQ16586 387 aa15.05■□□□□ -0
MDC1-206ENST00000489540 FAM27BQ5VT28 67 aa15.05■□□□□ -0
MDC1-206ENST00000489540 ADCK1Q86TW2 530 aa15.05■□□□□ -0
MDC1-206ENST00000489540 SPATA24Q86W54 205 aa15.05■□□□□ -0
MDC1-206ENST00000489540 CLDN22Q8N7P3 220 aa15.05■□□□□ -0
MDC1-206ENST00000489540 NUP37Q8NFH4 326 aa15.05■□□□□ -0
MDC1-206ENST00000489540 FGFBP3Q8TAT2 258 aa15.05■□□□□ -0
MDC1-206ENST00000489540 FANK1Q8TC84 345 aa15.05■□□□□ -0
MDC1-206ENST00000489540 CANT1Q8WVQ1 401 aa15.05■□□□□ -0
MDC1-206ENST00000489540 OR52D1Q9H346 318 aa15.05■□□□□ -0
MDC1-206ENST00000489540 YY1AP1Q9H869 796 aa15.05■□□□□ -0
MDC1-206ENST00000489540 IL20RAQ9UHF4 553 aa15.05■□□□□ -0
MDC1-206ENST00000489540 ARPC3O15145 178 aa15.04■□□□□ -0
MDC1-206ENST00000489540 IDH3BO43837 385 aa15.04■□□□□ -0
MDC1-206ENST00000489540 CST1P01037 141 aa15.04■□□□□ -0
MDC1-206ENST00000489540 PTHP01270 115 aa15.04■□□□□ -0
MDC1-206ENST00000489540 PATE4P0C8F1 98 aa15.04■□□□□ -0
MDC1-206ENST00000489540 ATP5J2P56134 94 aa15.04■□□□□ -0
MDC1-206ENST00000489540 HGFACQ04756 655 aa15.04■□□□□ -0
MDC1-206ENST00000489540 MICAQ29983 383 aa15.04■□□□□ -0
MDC1-206ENST00000489540 MESTQ5EB52 335 aa15.04■□□□□ -0
MDC1-206ENST00000489540 ZNF770Q6IQ21 691 aaPredicted RBP15.04■□□□□ -0
MDC1-206ENST00000489540 RPL13AP3Q6NVV1 102 aa15.04■□□□□ -0
MDC1-206ENST00000489540 MYPOPQ86VE0 399 aaPredicted RBP15.04■□□□□ -0
MDC1-206ENST00000489540 LRRC18Q8N456 261 aa15.04■□□□□ -0
MDC1-206ENST00000489540 OR9Q2Q8NGE9 314 aa15.04■□□□□ -0
MDC1-206ENST00000489540 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
MDC1-206ENST00000489540 C1orf198Q9H425 327 aa15.04■□□□□ -0
MDC1-206ENST00000489540 CA10Q9NS85 328 aa15.04■□□□□ -0
MDC1-206ENST00000489540 VSX1Q9NZR4 365 aaPredicted RBP15.04■□□□□ -0
MDC1-206ENST00000489540 SLC7A8Q9UHI5 535 aa15.04■□□□□ -0
MDC1-206ENST00000489540 SPEF1Q9Y4P9 236 aa15.04■□□□□ -0
MDC1-206ENST00000489540 AKAP9Q99996 3911 aa15.04■□□□□ -0
MDC1-206ENST00000489540 RAI1Q7Z5J4 1906 aaPredicted RBP15.03■□□□□ -0
MDC1-206ENST00000489540 GASTP01350 101 aa15.03■□□□□ -0
MDC1-206ENST00000489540 ZNF35P13682 527 aa15.03■□□□□ -0
MDC1-206ENST00000489540 SERPINF1P36955 418 aa15.03■□□□□ -0
MDC1-206ENST00000489540 PLP2Q04941 152 aa15.03■□□□□ -0
MDC1-206ENST00000489540 RAB39AQ14964 217 aa15.03■□□□□ -0
MDC1-206ENST00000489540 Q5PR19 223 aa15.03■□□□□ -0
MDC1-206ENST00000489540 FOXL2NBQ6ZUU3 175 aa15.03■□□□□ -0
MDC1-206ENST00000489540 HTRA1Q92743 480 aa15.03■□□□□ -0
MDC1-206ENST00000489540 NABP1Q96AH0 204 aa15.03■□□□□ -0
MDC1-206ENST00000489540 RASD2Q96D21 266 aa15.03■□□□□ -0
MDC1-206ENST00000489540 ERMAPQ96PL5 475 aaPredicted RBP15.03■□□□□ -0
MDC1-206ENST00000489540 IFT27Q9BW83 186 aa15.03■□□□□ -0
MDC1-206ENST00000489540 ZNF442Q9H7R0 627 aa15.03■□□□□ -0
MDC1-206ENST00000489540 CCNB1IP1Q9NPC3 277 aa15.03■□□□□ -0
MDC1-206ENST00000489540 U3KQV3 271 aa15.03■□□□□ -0
MDC1-206ENST00000489540 DSCAMO60469 2012 aa15.03■□□□□ -0
MDC1-206ENST00000489540 IQCMA0A1B0GVH7 501 aa15.02■□□□□ -0
MDC1-206ENST00000489540 TCRBV3S1A0A5B6 114 aa15.02■□□□□ -0
MDC1-206ENST00000489540 H7C1C5 153 aa15.02■□□□□ -0
MDC1-206ENST00000489540 GNGT2O14610 69 aa15.02■□□□□ -0
MDC1-206ENST00000489540 PPP1R3DO95685 299 aa15.02■□□□□ -0
MDC1-206ENST00000489540 MMP7P09237 267 aaPredicted RBP15.02■□□□□ -0
MDC1-206ENST00000489540 GSTM3P21266 225 aa15.02■□□□□ -0
MDC1-206ENST00000489540 PCBD1P61457 104 aa15.02■□□□□ -0
MDC1-206ENST00000489540 LCN6P62502 163 aa15.02■□□□□ -0
MDC1-206ENST00000489540 PPP1R8Q12972 351 aaKnown RBP15.02■□□□□ -0
MDC1-206ENST00000489540 DAG1Q14118 895 aa15.02■□□□□ -0
MDC1-206ENST00000489540 C11orf71Q6IPW1 123 aa15.02■□□□□ -0
MDC1-206ENST00000489540 ZNF620Q6ZNG0 422 aa15.02■□□□□ -0
MDC1-206ENST00000489540 RASSF6Q6ZTQ3 369 aa15.02■□□□□ -0
MDC1-206ENST00000489540 YTHDF3Q7Z739 585 aaKnown RBP15.02■□□□□ -0
MDC1-206ENST00000489540 KRTAP1-3Q8IUG1 177 aa15.02■□□□□ -0
MDC1-206ENST00000489540 AQP11Q8NBQ7 271 aa15.02■□□□□ -0
MDC1-206ENST00000489540 WFDC11Q8NEX6 87 aa15.02■□□□□ -0
MDC1-206ENST00000489540 SAMD8Q96LT4 415 aa15.02■□□□□ -0
MDC1-206ENST00000489540 WACQ9BTA9 647 aa15.02■□□□□ -0
MDC1-206ENST00000489540 DGCR6LQ9BY27 220 aa15.02■□□□□ -0
MDC1-206ENST00000489540 LRMDAQ9H2I8 198 aa15.02■□□□□ -0
MDC1-206ENST00000489540 VNN3Q9NY84 501 aa15.02■□□□□ -0
MDC1-206ENST00000489540 PMF1-BGLAPU3KQ54 211 aa15.02■□□□□ -0
MDC1-206ENST00000489540 A0A1W2PPL8 197 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 SOCS2O14508 198 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 SLC16A7O60669 478 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 KHDRBS3O75525 346 aaKnown RBP15.01□□□□□ -0.01
MDC1-206ENST00000489540 CST2P09228 141 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 OR4A8P0C604 315 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 CD99P14209 185 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 MSR1P21757 451 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 NR4A1P22736 598 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 NOS3P29474 1203 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 CDKN1AP38936 164 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 CDKN2AP42771 156 aaKnown RBP15.01□□□□□ -0.01
MDC1-206ENST00000489540 GALK2Q01415 458 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 HSF2Q03933 536 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 ETFDHQ16134 617 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 VHLLQ6RSH7 139 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 ZNF584Q8IVC4 421 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 PAPD5Q8NDF8 572 aaKnown RBP15.01□□□□□ -0.01
MDC1-206ENST00000489540 SLC30A7Q8NEW0 376 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 OR52L1Q8NGH7 329 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 OR1J2Q8NGS2 313 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 SNX18Q96RF0 628 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 TMUB1Q9BVT8 246 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms