RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 B3GAT2Q9NPZ5 323 aa18.48■□□□□ 0.55
SND1-214ENST00000489417 DNAJC13O75165 2243 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 ZNF593O00488 134 aaPredicted RBP18.47■□□□□ 0.55
SND1-214ENST00000489417 DHHO43323 396 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 UPK3AO75631 287 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 HRGP04196 525 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 HSMCR30P0CW71 290 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 ZNF823P16415 610 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 ADAM8P78325 824 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 DOC2BQ14184 412 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 SF3B4Q15427 424 aaKnown RBP eCLIP18.47■□□□□ 0.556e-14■■■■■ 37.6
SND1-214ENST00000489417 MEP1BQ16820 701 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 OTPQ5XKR4 325 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 ZNF585AQ6P3V2 769 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 C19orf48Q6RUI8 117 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 ZNF322Q6U7Q0 402 aaPredicted RBP18.47■□□□□ 0.55
SND1-214ENST00000489417 ZNF485Q8NCK3 441 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 SPRYD4Q8WW59 207 aaPredicted RBP18.47■□□□□ 0.55
SND1-214ENST00000489417 C11orf40Q8WZ69 217 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 MRPL48Q96GC5 212 aaKnown RBP18.47■□□□□ 0.55
SND1-214ENST00000489417 MGLLQ99685 303 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 GLRX2Q9NS18 164 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 TMEM14AQ9Y6G1 99 aa18.47■□□□□ 0.55
SND1-214ENST00000489417 SPARCP09486 303 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 SFTPCP11686 197 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 PSKH1P11801 424 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 ARMCX4Q5H9R4 360 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.46■□□□□ 0.55
SND1-214ENST00000489417 DPY19L4Q7Z388 723 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 OR10H5Q8NGA6 315 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 OTOSQ8NHW6 89 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 GATAD2BQ8WXI9 593 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 WNT2BQ93097 391 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 SNRNP40Q96DI7 357 aaKnown RBP18.46■□□□□ 0.55
SND1-214ENST00000489417 GMPPAQ96IJ6 420 aaPredicted RBP18.46■□□□□ 0.55
SND1-214ENST00000489417 OPALINQ96PE5 141 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 SLX1AQ9BQ83 275 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 TTTY10Q9BZA0 68 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 LINC00470Q9BZP3 86 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 FAM192AQ9GZU8 254 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 SLCO5A1Q9H2Y9 848 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 SEC61A2Q9H9S3 476 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 LAMP5Q9UJQ1 280 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 KLHDC2Q9Y2U9 406 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 UGT2A1Q9Y4X1 527 aa18.46■□□□□ 0.55
SND1-214ENST00000489417 CACNA1GO43497 2377 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 PHYHO14832 338 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 SS18L1O75177 396 aaPredicted RBP18.45■□□□□ 0.54
SND1-214ENST00000489417 TPOP07202 933 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 GABRA1P14867 456 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 AGTR1P30556 359 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 RPS27P42677 84 aaKnown RBP18.45■□□□□ 0.54
SND1-214ENST00000489417 ZNF84P51523 738 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 ACTA2P62736 377 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 ACTG2P63267 376 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 MLLT11Q13015 90 aaPredicted RBP18.45■□□□□ 0.54
SND1-214ENST00000489417 TEX30Q5JUR7 227 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 RIPPLY2Q5TAB7 128 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 NSUN5P2Q63ZY6 315 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 FOXL2NBQ6ZUU3 175 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 MYCBPQ99417 103 aaPredicted RBP18.45■□□□□ 0.54
SND1-214ENST00000489417 RBM24Q9BX46 236 aaKnown RBP18.45■□□□□ 0.54
SND1-214ENST00000489417 RBM38Q9H0Z9 239 aaKnown RBP18.45■□□□□ 0.54
SND1-214ENST00000489417 ISG20L2Q9H9L3 353 aaKnown RBP18.45■□□□□ 0.54
SND1-214ENST00000489417 ISYNA1Q9NPH2 558 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 KCNG2Q9UJ96 466 aa18.45■□□□□ 0.54
SND1-214ENST00000489417 OR6C65A6NJZ3 312 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 MT-ND5P03915 603 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 SCG5P05408 212 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 ALOX5APP20292 161 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 CDAP32320 146 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 KCNMB1Q16558 191 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 PCK2Q16822 640 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 CDONQ4KMG0 1287 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 PRR30Q53SZ7 412 aaPredicted RBP18.44■□□□□ 0.54
SND1-214ENST00000489417 TSPO2Q5TGU0 170 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 FOXB2Q5VYV0 432 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 NUFIP2Q7Z417 695 aaKnown RBP18.44■□□□□ 0.54
SND1-214ENST00000489417 CLVS1Q8IUQ0 354 aaPredicted RBP18.44■□□□□ 0.54
SND1-214ENST00000489417 SYS1Q8N2H4 156 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 ZNF454Q8N9F8 522 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 FAM57AQ8TBR7 257 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 SNX33Q8WV41 574 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 APH1AQ96BI3 265 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 YIPF6Q96EC8 236 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 POLE4Q9NR33 117 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 CEPT1Q9Y6K0 416 aa18.44■□□□□ 0.54
SND1-214ENST00000489417 CD8B2A6NJW9 211 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 H3BSA7 217 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 J3QLW9 94 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 WDR1O75083 606 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 KRT33AO76009 404 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 ABOP16442 354 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 ZNF19P17023 458 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 EDNRAP25101 427 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 PTGER4P35408 488 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 LIPAP38571 399 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 GUCA1AP43080 201 aaPredicted RBP18.43■□□□□ 0.54
SND1-214ENST00000489417 OR12D2P58182 307 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 TSTQ16762 297 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms