RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PAPD4Q6PIY7 484 aaKnown RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 DEGS2Q6QHC5 323 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 LANCL3Q6ZV70 420 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 NR2C2APQ86WQ0 139 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 AGBL5Q8NDL9 886 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 OTOSQ8NHW6 89 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 RAB40AQ8WXH6 277 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 CREB3L1Q96BA8 519 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 RNF121Q9H920 327 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 SERINC1Q9NRX5 453 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ACOXLQ9NUZ1 547 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 OCIAD1Q9NX40 245 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 MYOTQ9UBF9 498 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 EXTL2Q9UBQ6 330 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF346Q9UL40 294 aaKnown RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 RASD1Q9Y272 281 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 B3GALT5Q9Y2C3 310 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 B3GALT1Q9Y5Z6 326 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 FAM208BQ5VWN6 2430 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ZZEF1O43149 2961 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 CACNA1GO43497 2377 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 A0A087WZY1 265 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 TRBV5-5A0A0J9YX44 114 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 HMX3A6NHT5 357 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 FAM47E-STBD1D6RA91 191 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 PLPP3O14495 311 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 TP53I11O14683 189 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 PLA2G10O15496 165 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 LYRM1O43325 122 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 TLX3O43711 291 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ORC5O43913 435 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 SELENOFO60613 162 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 SLC43A1O75387 559 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 UPK3AO75631 287 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 HRGP04196 525 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 F13BP05160 661 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 KLK3P07288 261 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 NR2C1P13056 603 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ELK1P19419 428 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 SRMP19623 302 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 AZGP1P25311 298 aaKnown RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 CD82P27701 267 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 EIF1P41567 113 aaKnown RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF41P51814 821 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 RAG2P55895 527 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 RAB25P57735 213 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 BTG1P62324 171 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 GABREP78334 506 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 PUDPQ08623 228 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 RIPPLY1Q0D2K3 151 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 SELENBP1Q13228 472 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF239Q16600 458 aaKnown RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 NTRK2Q16620 822 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 PHF19Q5T6S3 580 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 PRAMEF17Q5VTA0 474 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 LIPNQ5VXI9 398 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 TIGD3Q6B0B8 471 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 SLC18B1Q6NT16 456 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 SHISA2Q6UWI4 295 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 H1FNTQ75WM6 255 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 RHOUQ7L0Q8 258 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 DTX1Q86Y01 620 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF679Q8IYX0 411 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 PRR22Q8IZ63 422 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 OR6V1Q8N148 313 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ARMC10Q8N2F6 343 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 SAMD12Q8N8I0 201 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 OR5AK2Q8NH90 309 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 TRMT10AQ8TBZ6 339 aaKnown RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 GPR148Q8TDV2 347 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 DUSP19Q8WTR2 217 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 NSMAFQ92636 917 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 RFT1Q96AA3 541 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ADAD1Q96M93 576 aaKnown RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 DERL3Q96Q80 235 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 TAAR9Q96RI9 348 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 WDR77Q9BQA1 342 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 WACQ9BTA9 647 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 CRB3Q9BUF7 120 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 DDA1Q9BW61 102 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 RTN4RQ9BZR6 473 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 C11orf54Q9H0W9 315 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ABCG5Q9H222 651 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 ALKBH4Q9NXW9 302 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 GPN3Q9UHW5 284 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-207ENST00000489357 COPS3Q9UNS2 423 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 CAMK2AQ9UQM7 478 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 RAXQ9Y2V3 346 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 LOXL2Q9Y4K0 774 aa7.6□□□□□ -1.19
VTI1A-207ENST00000489357 IGLV1-36A0A0B4J1U3 117 aa7.59□□□□□ -1.19
VTI1A-207ENST00000489357 TRBV11-1A0A0K0K1C0 115 aa7.59□□□□□ -1.19
VTI1A-207ENST00000489357 LOC102725191A0A1B0GVB3 256 aa7.59□□□□□ -1.19
VTI1A-207ENST00000489357 TMEM72A0PK05 275 aa7.59□□□□□ -1.19
VTI1A-207ENST00000489357 MEIOCA2RUB1 952 aa7.59□□□□□ -1.19
VTI1A-207ENST00000489357 IFITM5A6NNB3 132 aa7.59□□□□□ -1.19
VTI1A-207ENST00000489357 B4DXG7 233 aa7.59□□□□□ -1.19
VTI1A-207ENST00000489357 C9J4A7 227 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms