RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TXNIPQ9H3M7 391 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 EFCAB1Q9HAE3 211 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 SIAEQ9HAT2 523 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 MAN2C1Q9NTJ4 1040 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 TAAR3PQ9P1P4 343 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 STX18Q9P2W9 335 aaKnown RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 LPAR3Q9UBY5 353 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF346Q9UL40 294 aaKnown RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 HIF3AQ9Y2N7 669 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 COL6A5A8TX70 2615 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 TRAV27A0A087WT01 109 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 HTR3EA5X5Y0 456 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 EFCAB9A8MZ26 197 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 SERPINA1P01009 418 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 TACSTD2P09758 323 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 NCK1P16333 377 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 CCNOP22674 350 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 RAD52P43351 418 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 GSK3BP49841 420 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 UCP2P55851 309 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 SELENOVP59797 346 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 CTXN1P60606 82 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 RPL27P61353 136 aaKnown RBP10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 MRPS34P82930 218 aaKnown RBP10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 HSF2Q03933 536 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 PRKCDQ05655 676 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 FHL1Q13642 323 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 NKPD1Q17RQ9 610 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 TBC1D28Q2M2D7 210 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 IFI44LQ53G44 452 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 C8orf82Q6P1X6 216 aaPredicted RBP10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC25A47Q6Q0C1 308 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 OAFQ86UD1 273 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 OFCC1Q8IZS5 231 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 ICA1LQ8NDH6 482 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 OR1J2Q8NGS2 313 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 SPATA3Q8NHX4 192 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 SYNPRQ8TBG9 265 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 GEMIN6Q8WXD5 167 aaKnown RBP10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 C11orf40Q8WZ69 217 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 NABP1Q96AH0 204 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 TSPAN32Q96QS1 320 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 RBP7Q96R05 134 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 ELAC2Q9BQ52 826 aaKnown RBP10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 LRMDAQ9H2I8 198 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 C1orf198Q9H425 327 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 CCNB1IP1Q9NPC3 277 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 MED4Q9NPJ6 270 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 RTTNQ86VV8 2226 aa10.23□□□□□ -0.77
CCHCR1-215ENST00000488920 A0A087WUU8 490 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 NPIPB13A6NJU9 1138 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 NPIPB4C9JG80 1138 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 PHF1O43189 567 aaPredicted RBP10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 MGRN1O60291 552 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 SNAP29O95721 258 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF250P15622 560 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF32P17041 273 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 SRD5A1P18405 259 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 STOMP27105 288 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 APLNRP35414 380 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 MAGEB1P43366 347 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 NUDT2P50583 147 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 ERVK-25P63136 954 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 CCNIQ14094 377 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 TAF11Q15544 211 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 THEM4Q5T1C6 240 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF730Q6ZMV8 503 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 CBLL1Q75N03 491 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 LRRC75AQ8NAA5 344 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 OR13C2Q8NGS9 318 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 AKR7LQ8NHP1 331 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF519Q8TB69 540 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 ACOT11Q8WXI4 607 aaPredicted RBP10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 RDH5Q92781 318 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 HPS1Q92902 700 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 YIPF5Q969M3 257 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 FAM162AQ96A26 154 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 HSH2DQ96JZ2 352 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 KCTD14Q9BQ13 255 aaPredicted RBP10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 ALG12Q9BV10 488 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 SMURF2Q9HAU4 748 aa10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 HINT3Q9NQE9 182 aaKnown RBP10.22□□□□□ -0.77
CCHCR1-215ENST00000488920 SVEP1Q4LDE5 3571 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 FBN3Q75N90 2809 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 LOC100509620A0A075B734 347 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 C5orf49A4QMS7 147 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 NCR1O76036 304 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 PRSS23O95084 383 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 IGHMP01871 453 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 LAP3P28838 519 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 GPR4P46093 362 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 GPR6P46095 362 aaPredicted RBP10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 PSME3P61289 254 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 PSG4Q00888 419 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 GLO1Q04760 184 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 CR1LQ2VPA4 569 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 FAM27BQ5VT28 67 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 TMEM154Q6P9G4 183 aa10.21□□□□□ -0.77
CCHCR1-215ENST00000488920 HACD2Q6Y1H2 254 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms