RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ALKBH6Q3KRA9 238 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 C8orf82Q6P1X6 216 aaPredicted RBP16.55■□□□□ 0.24
CD55-209ENST00000488171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■□□□ 12.4
CD55-209ENST00000488171 SLC25A47Q6Q0C1 308 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 MEX3DQ86XN8 651 aaKnown RBP16.55■□□□□ 0.24
CD55-209ENST00000488171 OFCC1Q8IZS5 231 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 LRRC75AQ8NAA5 344 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 CPEB3Q8NE35 698 aaKnown RBP16.55■□□□□ 0.24
CD55-209ENST00000488171 TMEM158Q8WZ71 300 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 LZICQ8WZA0 190 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 YIPF5Q969M3 257 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 C1orf159Q96HA4 380 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 TSPAN32Q96QS1 320 aa16.55■□□□□ 0.24
CD55-209ENST00000488171 IQCMA0A1B0GVH7 501 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 HTR3EA5X5Y0 456 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 NME4O00746 187 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 IGHMP01871 453 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 UCP2P55851 309 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 PLP2Q04941 152 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 CD47Q08722 323 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 TOP3AQ13472 1001 aaPredicted RBP16.54■□□□□ 0.24
CD55-209ENST00000488171 TAF11Q15544 211 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 CR1LQ2VPA4 569 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 PABPC1L2AQ5JQF8 200 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 NRMQ8IXM6 262 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 CLDN22Q8N7P3 220 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 OR1J2Q8NGS2 313 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 NSMAFQ92636 917 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 RDH5Q92781 318 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 TAAR3PQ9P1P4 343 aa16.54■□□□□ 0.24
CD55-209ENST00000488171 ZNF346Q9UL40 294 aaKnown RBP16.54■□□□□ 0.24
CD55-209ENST00000488171 CXCR6O00574 342 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 PRSS23O95084 383 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 IFNW1P05000 195 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 LCKP06239 509 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 ACHEP22303 614 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 IFNA8P32881 189 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 MDH1P40925 334 aaKnown RBP16.53■□□□□ 0.24
CD55-209ENST00000488171 RAD52P43351 418 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 SLC7A2P52569 658 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 CDH15P55291 814 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 KLF3P57682 345 aaPredicted RBP16.53■□□□□ 0.24
CD55-209ENST00000488171 RPL27P61353 136 aaKnown RBP16.53■□□□□ 0.24
CD55-209ENST00000488171 PRKCDQ05655 676 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 CCNIQ14094 377 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 CBLL1Q75N03 491 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 IGFN1Q86VF2 1251 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 LINC01356Q8N9X3 169 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 ZNF519Q8TB69 540 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 SYNPRQ8TBG9 265 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 ALG12Q9BV10 488 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 FNDC11Q9BVV2 318 aa16.53■□□□□ 0.24
CD55-209ENST00000488171 TRAV27A0A087WT01 109 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 ZNF682O95780 498 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 SAGP10523 405 aaPredicted RBP16.52■□□□□ 0.24
CD55-209ENST00000488171 ZNF32P17041 273 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 HNF1AP20823 631 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 APLNRP35414 380 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 MAGEB1P43366 347 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 CTXN1P60606 82 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 MRPS11P82912 194 aaKnown RBP16.52■□□□□ 0.24
CD55-209ENST00000488171 HSF2Q03933 536 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 TRAM2Q15035 370 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 SGCAQ16586 387 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 NKPD1Q17RQ9 610 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 TREML1Q86YW5 311 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 OR51A7Q8NH64 312 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 GEMIN6Q8WXD5 167 aaKnown RBP16.52■□□□□ 0.24
CD55-209ENST00000488171 C11orf40Q8WZ69 217 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 HOPXQ9BPY8 73 aaPredicted RBP16.52■□□□□ 0.24
CD55-209ENST00000488171 BCL2L14Q9BZR8 327 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 RACGAP1Q9H0H5 632 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 LRMDAQ9H2I8 198 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 KCNN2Q9H2S1 579 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 CCNB1IP1Q9NPC3 277 aa16.52■□□□□ 0.24
CD55-209ENST00000488171 ZNF275Q9NSD4 429 aaPredicted RBP16.52■□□□□ 0.24
CD55-209ENST00000488171 C17orf100A8MU93 164 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 CCDC22O60826 627 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 RP2O75695 350 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 NR2C1P13056 603 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 STOMP27105 288 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 GPR6P46095 362 aaPredicted RBP16.51■□□□□ 0.23
CD55-209ENST00000488171 GSK3BP49841 420 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 SELENOVP59797 346 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 PSG4Q00888 419 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 KRTAP24-1Q3LI83 254 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 IFI44LQ53G44 452 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 HSP90B2PQ58FF3 399 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 THEM4Q5T1C6 240 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 FAM27BQ5VT28 67 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 FOXL2NBQ6ZUU3 175 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 OR13C2Q8NGS9 318 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 CLDND2Q8NHS1 167 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 ACOT11Q8WXI4 607 aaPredicted RBP16.51■□□□□ 0.23
CD55-209ENST00000488171 POM121L2Q96KW2 1035 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 HINT3Q9NQE9 182 aaKnown RBP16.51■□□□□ 0.23
CD55-209ENST00000488171 LOC100509620A0A075B734 347 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 A0A087WUU8 490 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 GMNCA6NCL1 334 aa16.51■□□□□ 0.23
CD55-209ENST00000488171 EFCAB9A8MZ26 197 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms