RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 LAPTM4AQ15012 233 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ALG10Q5BKT4 473 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 PABPC1L2AQ5JQF8 200 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 TMEM53Q6P2H8 277 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 FOXL2NBQ6ZUU3 175 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 RFPL4BQ6ZWI9 263 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 DPPA2Q7Z7J5 298 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 IGFN1Q86VF2 1251 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 NRMQ8IXM6 262 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ZNF101Q8IZC7 436 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 LRRC18Q8N456 261 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ZNF540Q8NDQ6 660 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 OR13C2Q8NGS9 318 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 RP9Q8TA86 221 aaKnown RBP9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 GEMIN6Q8WXD5 167 aaKnown RBP9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 GTF3AQ92664 365 aaKnown RBP9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 HPS1Q92902 700 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 YIPF5Q969M3 257 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 C1orf159Q96HA4 380 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 HSH2DQ96JZ2 352 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 REPIN1Q9BWE0 567 aaKnown RBP9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 BEX2Q9BXY8 128 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 C1orf198Q9H425 327 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ABCD2Q9UBJ2 740 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 REV1Q9UBZ9 1251 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 DYSFO75923 2080 aa9.6□□□□□ -0.87
RAB11FIP3-210ENST00000487899 RNF212BA8MTL3 300 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 VSTM5A8MXK1 200 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ZNF682O95780 498 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ZNF32P17041 273 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 SRD5A1P18405 259 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 LSP1P33241 339 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 MDH1P40925 334 aaKnown RBP9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 WNT5AP41221 380 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 MAGEB1P43366 347 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 NUDT2P50583 147 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 KLF3P57682 345 aaPredicted RBP9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 CCNIQ14094 377 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 TBC1D28Q2M2D7 210 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ALKBH6Q3KRA9 238 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 RGS7BPQ6MZT1 257 aaPredicted RBP9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 SLC25A47Q6Q0C1 308 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 HACD2Q6Y1H2 254 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 CBLL1Q75N03 491 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 FAM156AQ8NDB6 213 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 ALG12Q9BV10 488 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 RACGAP1Q9H0H5 632 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 MS4A5Q9H3V2 200 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 SIAEQ9HAT2 523 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 CDH20Q9HBT6 801 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 MED4Q9NPJ6 270 aa9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 STX18Q9P2W9 335 aaKnown RBP9.59□□□□□ -0.87
RAB11FIP3-210ENST00000487899 WNK2Q9Y3S1 2297 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 LOC100509620A0A075B734 347 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 A0A087WUU8 490 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 H7C1C5 153 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 WNT9BO14905 357 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ICMTO60725 284 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 SERPINA1P01009 418 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 TGFAP01135 160 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 SAGP10523 405 aaPredicted RBP9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ACHEP22303 614 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 GPR4P46093 362 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 RPL27P61353 136 aaKnown RBP9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 LCN6P62502 163 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ERVK-25P63136 954 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 GLO1Q04760 184 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 PRKCDQ05655 676 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 TRAM2Q15035 370 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 TAF11Q15544 211 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 NKPD1Q17RQ9 610 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 CR1LQ2VPA4 569 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 IFI44LQ53G44 452 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 FAM205BPQ63HN1 556 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 FAM122BQ7Z309 247 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 FAM86B1Q8N7N1 296 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 AKR7LQ8NHP1 331 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 CLDND2Q8NHS1 167 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 IPCEF1Q8WWN9 437 aaPredicted RBP9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ACOT11Q8WXI4 607 aaPredicted RBP9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 LZICQ8WZA0 190 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 NSMAFQ92636 917 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 POM121L2Q96KW2 1035 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 MYLK2Q9H1R3 596 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 RNF121Q9H920 327 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ZNF275Q9NSD4 429 aaPredicted RBP9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 DUSP13Q9UII6 198 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ZNF346Q9UL40 294 aaKnown RBP9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 AP3M1Q9Y2T2 418 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ADAM18Q9Y3Q7 739 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 ARHGAP32A7KAX9 2087 aa9.58□□□□□ -0.88
RAB11FIP3-210ENST00000487899 NBEAL1Q6ZS30 2694 aa9.57□□□□□ -0.88
RAB11FIP3-210ENST00000487899 IQCMA0A1B0GVH7 501 aa9.57□□□□□ -0.88
RAB11FIP3-210ENST00000487899 SLC22A23A1A5C7 686 aa9.57□□□□□ -0.88
RAB11FIP3-210ENST00000487899 HTR3EA5X5Y0 456 aa9.57□□□□□ -0.88
RAB11FIP3-210ENST00000487899 GMNCA6NCL1 334 aa9.57□□□□□ -0.88
RAB11FIP3-210ENST00000487899 C17orf100A8MU93 164 aa9.57□□□□□ -0.88
RAB11FIP3-210ENST00000487899 SCG5P05408 212 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms