RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MMP7P09237 267 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF35P13682 527 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 PTDSS1P48651 473 aaKnown RBP15.6■□□□□ 0.09
HDAC6-225ENST00000483506 HGFACQ04756 655 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 PIGFQ07326 219 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 RFX4Q33E94 735 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 SLC36A2Q495M3 483 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 ADCK1Q86TW2 530 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF584Q8IVC4 421 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 GNPDA2Q8TDQ7 276 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 CADM1Q9BY67 442 aaKnown RBP15.6■□□□□ 0.09
HDAC6-225ENST00000483506 OR52D1Q9H346 318 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF442Q9H7R0 627 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 CA10Q9NS85 328 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 VSX1Q9NZR4 365 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-225ENST00000483506 POMPQ9Y244 141 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 TEX13CA0A0J9YWL9 993 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 XKRYO14609 159 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 IMPA2O14732 288 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 ARPC3O15145 178 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 SERPINA5P05154 406 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 PATE4P0C8F1 98 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 RASSF2P50749 326 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 ATP5J2P56134 94 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 KRR1Q13601 381 aaKnown RBP15.59■□□□□ 0.09
HDAC6-225ENST00000483506 FLOT2Q14254 428 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 FAM27BQ5VT28 67 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF620Q6ZNG0 422 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 SLC16A14Q7RTX9 510 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 CANT1Q8WVQ1 401 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 NSMAFQ92636 917 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 HTRA1Q92743 480 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 GTPBP3Q969Y2 492 aaKnown RBP15.59■□□□□ 0.09
HDAC6-225ENST00000483506 TRMT61AQ96FX7 289 aaKnown RBP15.59■□□□□ 0.09
HDAC6-225ENST00000483506 MS4A3Q96HJ5 214 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 CHID1Q9BWS9 393 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 DLL4Q9NR61 685 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 VNN3Q9NY84 501 aa15.59■□□□□ 0.09
HDAC6-225ENST00000483506 MTORP42345 2549 aa15.58■□□□□ 0.09
HDAC6-225ENST00000483506 ARFGEF3Q5TH69 2177 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 TCRBV3S1A0A5B6 114 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 DHRS12A0PJE2 317 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 H7C1C5 153 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 H7C417 338 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 SLC6A6P31641 620 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 CDAP32320 146 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 CDKN1AP38936 164 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 RPS6KA3P51812 740 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 LCN6P62502 163 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 ETFDHQ16134 617 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 SWI5Q1ZZU3 235 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 MST1LQ2TV78 715 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 TMEM53Q6P2H8 277 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 YTHDF3Q7Z739 585 aaKnown RBP15.58■□□□□ 0.08
HDAC6-225ENST00000483506 OR9Q2Q8NGE9 314 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 RASD2Q96D21 266 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 C1orf198Q9H425 327 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 REEP1Q9H902 201 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 IL20RAQ9UHF4 553 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 SLC7A8Q9UHI5 535 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 IER3IP1Q9Y5U9 82 aa15.58■□□□□ 0.08
HDAC6-225ENST00000483506 CCNB2O95067 398 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 CST2P09228 141 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 NR4A1P22736 598 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 RAB39AQ14964 217 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 EFNB3Q15768 340 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 ADIPOQQ15848 244 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 RPL13AP3Q6NVV1 102 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 SNX18Q96RF0 628 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 DGCR6LQ9BY27 220 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 MMADHCQ9H3L0 296 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-225ENST00000483506 SAMHD1Q9Y3Z3 626 aaKnown RBP15.57■□□□□ 0.08
HDAC6-225ENST00000483506 CDH10Q9Y6N8 788 aa15.57■□□□□ 0.08
HDAC6-225ENST00000483506 ARRDC5A6NEK1 342 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 IDH3BO43837 385 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 PPP1R3DO95685 299 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 SNAP29O95721 258 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 GASTP01350 101 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 IGHV4-39P01824 125 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 CD99P14209 185 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 FOSL1P15407 271 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 CTLA4P16410 223 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 MSR1P21757 451 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 SERPINF1P36955 418 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 MICAQ29983 383 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 PTCHD4Q6ZW05 846 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 LRRC18Q8N456 261 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 PAPD5Q8NDF8 572 aaKnown RBP15.56■□□□□ 0.08
HDAC6-225ENST00000483506 FBXO17Q96EF6 278 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 SAMD8Q96LT4 415 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 WACQ9BTA9 647 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 CACNG6Q9BXT2 260 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 SYT4Q9H2B2 425 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 LRMDAQ9H2I8 198 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 POLE4Q9NR33 117 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 IL20Q9NYY1 176 aa15.56■□□□□ 0.08
HDAC6-225ENST00000483506 B9A039 149 aa15.55■□□□□ 0.08
HDAC6-225ENST00000483506 SOCS2O14508 198 aa15.55■□□□□ 0.08
HDAC6-225ENST00000483506 CST1P01037 141 aa15.55■□□□□ 0.08
HDAC6-225ENST00000483506 PTHP01270 115 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms