RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 Q96M85 177 aa12.96□□□□□ -0.33
COL9A2-207ENST00000482722 C1orf198Q9H425 327 aa12.96□□□□□ -0.33
COL9A2-207ENST00000482722 C14orf105Q9NVL8 296 aa12.96□□□□□ -0.33
COL9A2-207ENST00000482722 DHCR7Q9UBM7 475 aaKnown RBP12.96□□□□□ -0.33
COL9A2-207ENST00000482722 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
COL9A2-207ENST00000482722 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 GGT3PA6NGU5 568 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 C2CD4DB7Z1M9 353 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 F5H0A9 414 aaPredicted RBP12.96□□□□□ -0.34
COL9A2-207ENST00000482722 PRKNO60260 465 aaPredicted RBP12.96□□□□□ -0.34
COL9A2-207ENST00000482722 PMS2P2O95744 297 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 ITGB2P05107 769 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 THBS1P07996 1170 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 OR8G3PP0DMU2 310 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 PNLIPRP2P54317 469 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 GGTLC2Q14390 218 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 C10orf91Q5T1B1 145 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 TMEM184AQ6ZMB5 413 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 FAM122BQ7Z309 247 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 BIVMQ86UB2 503 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 LRRTM1Q86UE6 522 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 OR5M8Q8NGP6 311 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 SLC22A8Q8TCC7 542 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 PAQR8Q8TEZ7 354 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 CDCA3Q99618 268 aaPredicted RBP12.96□□□□□ -0.34
COL9A2-207ENST00000482722 PTDSS2Q9BVG9 487 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 TINAGL1Q9GZM7 467 aaPredicted RBP12.96□□□□□ -0.34
COL9A2-207ENST00000482722 SLITRK2Q9H156 845 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 CD207Q9UJ71 328 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 HEBP2Q9Y5Z4 205 aa12.96□□□□□ -0.34
COL9A2-207ENST00000482722 TMEM82A0PJX8 343 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 KCNAB3O43448 404 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 PLRG1O43660 514 aaKnown RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 OR2T1O43869 369 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 CELA2BP08218 269 aaPredicted RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 EMDP50402 254 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 NKAIN2Q5VXU1 208 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 STEAP1BQ6NZ63 245 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 FIGLAQ6QHK4 219 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 OR1J2Q8NGS2 313 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 BMFQ96LC9 184 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 BCL2L14Q9BZR8 327 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 CHRNA9Q9UGM1 479 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 STEAP1Q9UHE8 339 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 C19orf53Q9UNZ5 99 aaPredicted RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 SLC22A7Q9Y694 548 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 UNC13CQ8NB66 2214 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 TRAV8-7A0A075B6U6 113 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 TCRBV21S2A2A0A5A6 115 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 CTAG2O75638 210 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 SNAPINO95295 136 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 FBXO45P0C2W1 286 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 DIO1P49895 249 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ATP1B3P54709 279 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 GAS6Q14393 721 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ACOT7LQ6ZUV0 252 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 SLC35F3Q8IY50 421 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 OR4N2Q8NGD1 307 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 RPS4Y2Q8TD47 263 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 RERGQ96A58 199 aaPredicted RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ZNF251Q9BRH9 671 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 LMAN2LQ9H0V9 348 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 NIT2Q9NQR4 276 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 COMMD9Q9P000 198 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 SERTAD3Q9UJW9 196 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 A0A1B0GTI1 187 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 H0YGG7 62 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 TO15178 435 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ANXA2P07355 339 aaKnown RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 SMIM6P0DI80 62 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 CASRP41180 1078 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ARF3P61204 181 aaPredicted RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 C1orf61Q13536 156 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 GPR18Q14330 331 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 RAB30Q15771 203 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 DEFB110Q30KQ9 67 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 Q499Y3 187 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 LIPNQ5VXI9 398 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ZNF704Q6ZNC4 412 aaPredicted RBP12.95□□□□□ -0.34
COL9A2-207ENST00000482722 USP53Q70EK8 1073 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 CLEC1AQ8NC01 280 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 CCDC107Q8WV48 283 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 FAM3CQ92520 227 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 RELTQ969Z4 430 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 DNAJA3Q96EY1 480 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 ULBP3Q9BZM4 244 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 TREM1Q9NP99 234 aa12.95□□□□□ -0.34
COL9A2-207ENST00000482722 SPAG17Q6Q759 2223 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 A0A0B4J2E0 115 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 A0A1B0GX12 115 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 PRR19A6NJB7 356 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 TMEM127O75204 238 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 SLC25A4P12235 298 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 HABP2Q14520 560 aaPredicted RBP12.94□□□□□ -0.34
COL9A2-207ENST00000482722 FCRL6Q6DN72 434 aa12.94□□□□□ -0.34
COL9A2-207ENST00000482722 C3orf33Q6P1S2 294 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms