RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TMEM38AQ9H6F2 299 aa9.44□□□□□ -0.9
PRPF4B-206ENST00000481109 APMAPQ9HDC9 416 aa9.44□□□□□ -0.9
PRPF4B-206ENST00000481109 PSG11Q9UQ72 335 aa9.44□□□□□ -0.9
PRPF4B-206ENST00000481109 AMDHD2Q9Y303 409 aa9.44□□□□□ -0.9
PRPF4B-206ENST00000481109 NRXN2Q9P2S2 1712 aa9.44□□□□□ -0.9
PRPF4B-206ENST00000481109 A0A1B0GV72 72 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 CLEC18AA5D8T8 446 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 WDR1O75083 606 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 ECI2O75521 394 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 IL3P08700 152 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 FGF5P12034 268 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 MAKP20794 623 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 LPAR6P43657 344 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 MTNR1AP48039 350 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 GABRA4P48169 554 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SULT1A2P50226 295 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 WNT3AP56704 352 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 ABRAXAS2Q15018 415 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SURF1Q15526 300 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 MORN2Q502X0 79 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 BEX5Q5H9J7 111 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 AGBL4Q5VU57 503 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 TMEM220Q6QAJ8 160 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 COLCA1Q6ZS62 124 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SLC25A26Q70HW3 274 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 KRTCAP2Q8N6L1 136 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 CLEC18CQ8NCF0 446 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 PLPP5Q8NEB5 264 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 REPS2Q8NFH8 660 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 NDRG1Q92597 394 aaKnown RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 RAB39BQ96DA2 213 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 ANGPTL4Q9BY76 406 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SLC17A9Q9BYT1 436 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 MAGT1Q9H0U3 335 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 CHST8Q9H2A9 424 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SMDT1Q9H4I9 107 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 RDH14Q9HBH5 336 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 GALPQ9UBC7 116 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 CORO2BQ9UQ03 480 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 LRRC37AA6NMS7 1700 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 A0A0G2JMZ2 1700 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 LRRC37A2A6NM11 1700 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 PRAMEF27A3QJZ7 478 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 TMEM150BA6NC51 233 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 MGAT4DA6NG13 374 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 PRAMEF25A6NGN4 478 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 PROB1E7EW31 1015 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 ACOT7O00154 380 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 FRS3O43559 492 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 TLX2O43763 284 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 PRAMEF4O60810 478 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 MMP23AO75900 390 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SNAI1O95863 264 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 CRYGCP07315 174 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 CXCL1P09341 107 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 ITGB5P18084 799 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 OR10J1P30954 320 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SCNN1AP37088 669 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 TRA2BP62995 288 aaKnown RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 CRMP1Q14194 572 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 PRAMEF9Q5VWM5 478 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 PLPPR4Q7Z2D5 763 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 SELENOHQ8IZQ5 122 aaKnown RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 STEAP2Q8NFT2 490 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 C20orf24Q9BUV8 137 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 POLR3KQ9Y2Y1 108 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 NME7Q9Y5B8 376 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 OR51B4Q9Y5P0 310 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 HS3ST3B1Q9Y662 390 aa9.43□□□□□ -0.9
PRPF4B-206ENST00000481109 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 TRAV1-2A0A0B4J238 106 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 CXCL11O14625 94 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 NDUFB8O95169 186 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 LIPCP11150 499 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ZNF7P17097 686 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 RAB6AP20340 208 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 PPIBP23284 216 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 PTH2RP49190 550 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 PDLIM4P50479 330 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 POLR2HP52434 150 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 SLAQ13239 276 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 TAF13Q15543 124 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 PTPRNQ16849 979 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ZNF699Q32M78 642 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 SLC25A35Q3KQZ1 300 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 IGF2-ASQ6U949 168 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 BCDIN3DQ7Z5W3 292 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 S100A7AQ86SG5 101 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 PIM3Q86V86 326 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 OR4C5Q8NGB2 326 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 OR13C2Q8NGS9 318 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 OR1P1Q8NH06 330 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 SFXN5Q8TD22 340 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ADAMTS18Q8TE60 1221 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 SLC25A38Q96DW6 304 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 TMEM176AQ96HP8 235 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 ZFYVE21Q9BQ24 234 aa9.42□□□□□ -0.9
PRPF4B-206ENST00000481109 AIF1LQ9BQI0 150 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms