RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 FAM27BQ5VT28 67 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 ALKBH2Q6NS38 261 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 ZBTB46Q86UZ6 589 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 SKA3Q8IX90 412 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 PIK3IP1Q96FE7 263 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 TMEM204Q9BSN7 226 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 RACGAP1Q9H0H5 632 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 CLEC4MQ9H2X3 399 aaPredicted RBP17.22■□□□□ 0.35
LIME1-205ENST00000480139 CMC2Q9NRP2 79 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 USE1Q9NZ43 259 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 FBXL3Q9UKT7 428 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 FKBP7Q9Y680 259 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 HRNRQ86YZ3 2850 aaPredicted RBP17.21■□□□□ 0.35
LIME1-205ENST00000480139 IGLV1-36A0A0B4J1U3 117 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 OR6C68A6NDL8 312 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 ZNF503-AS2A6NEH8 195 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 IGLV1-44P01699 117 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 IGFBP5P24593 272 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 PTAFRP25105 342 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 POU1F1P28069 291 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 CDAP32320 146 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 ZNF83P51522 516 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 TUBA1BP68363 451 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 TUBA4AP68366 448 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 BSPH1Q075Z2 132 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 GINS1Q14691 196 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 GSG1Q2KHT4 349 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 TUBA1AQ71U36 451 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 TMEM200AQ86VY9 491 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 GLB1L2Q8IW92 636 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 CIB1Q99828 191 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 WACQ9BTA9 647 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 TEX12Q9BXU0 123 aa17.21■□□□□ 0.35
LIME1-205ENST00000480139 A0A1W2PPL8 197 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 DPRXA6NFQ7 191 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 RIIAD1A6NNX1 92 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 HLA-HP01893 362 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 HMGN1P05114 100 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 ALPLP05186 524 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 ZNF3P17036 446 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 MSR1P21757 451 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 CD40P25942 277 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 LAP3P28838 519 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 CAPZA2P47755 286 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 ETFDHQ16134 617 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 SLC36A2Q495M3 483 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 FBXW10Q5XX13 1052 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 ACSM5Q6NUN0 579 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 SLC16A14Q7RTX9 510 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 MDP1Q86V88 176 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 OR6V1Q8N148 313 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 IQCF1Q8N6M8 205 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 SLC37A3Q8NCC5 494 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 RADILQ96JH8 1075 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 SLC38A2Q96QD8 506 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 HS3ST6Q96QI5 342 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 SH3GL3Q99963 347 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 C9orf16Q9BUW7 83 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 GABARAPL3Q9BY60 117 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 NMNAT2Q9BZQ4 307 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 RPRD1BQ9NQG5 326 aaKnown RBP17.2■□□□□ 0.34
LIME1-205ENST00000480139 POLE4Q9NR33 117 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 B9D1Q9UPM9 204 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 FBN2P35556 2912 aa17.2■□□□□ 0.34
LIME1-205ENST00000480139 IGHV1-18A0A0C4DH31 117 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 M0R1B8 84 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 DCTN6O00399 190 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 MITFO75030 526 aaPredicted RBP17.19■□□□□ 0.34
LIME1-205ENST00000480139 CD3EP07766 207 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 CST2P09228 141 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 PTDSS1P48651 473 aaKnown RBP17.19■□□□□ 0.34
LIME1-205ENST00000480139 ALDH3A2P51648 485 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 SLC25A1P53007 311 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 GLO1Q04760 184 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 DAG1Q14118 895 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 CRMP1Q14194 572 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 PTGES3Q15185 160 aaKnown RBP17.19■□□□□ 0.34
LIME1-205ENST00000480139 KCNMB1Q16558 191 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 SGCAQ16586 387 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 CDC20BQ86Y33 519 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 OR2T4Q8NH00 348 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 ZNF75AQ96N20 296 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 TSSK2Q96PF2 358 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 KCNN2Q9H2S1 579 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 SEC61A2Q9H9S3 476 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 COA3Q9Y2R0 106 aaPredicted RBP17.19■□□□□ 0.34
LIME1-205ENST00000480139 RNF115Q9Y4L5 304 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 ABCA4P78363 2273 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 APCP25054 2843 aa17.19■□□□□ 0.34
LIME1-205ENST00000480139 ABCA12Q86UK0 2595 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 ZAR1LA6NP61 321 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 EI24O14681 340 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 SURF4O15260 269 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 RAB36O95755 333 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 BAG2O95816 211 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 MMP7P09237 267 aaPredicted RBP17.18■□□□□ 0.34
LIME1-205ENST00000480139 CD79AP11912 226 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 ANPEPP15144 967 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 LSM6P62312 80 aaKnown RBP17.18■□□□□ 0.34
LIME1-205ENST00000480139 RAB1AP62820 205 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms