RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SLC38A2Q96QD8 506 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 NMNAT3Q96T66 252 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 DGCR6LQ9BY27 220 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 SMURF2Q9HAU4 748 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 NTN4Q9HB63 628 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 MOKQ9UQ07 419 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 MGAT4BQ9UQ53 548 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 AP4S1Q9Y587 144 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 ARRDC5A6NEK1 342 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 HS3ST1O14792 307 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 SLC16A7O60669 478 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 DEAF1O75398 565 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-222ENST00000478095 UBL3O95164 117 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 ATE1O95260 518 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 RAB36O95755 333 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 TXNDC12O95881 172 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 IGKV3-15P01624 115 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 IGLV1-44P01699 117 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 RAF1P04049 648 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 TP53P04637 393 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-222ENST00000478095 APEHP13798 732 aaKnown RBP8.93□□□□□ -0.98
HDAC6-222ENST00000478095 CBR1P16152 277 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 GSTM3P21266 225 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 NOS3P29474 1203 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 CALCRP30988 508 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 ACTR3P61158 418 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 RAB1AP62820 205 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 MRPS34P82930 218 aaKnown RBP8.93□□□□□ -0.98
HDAC6-222ENST00000478095 GK3PQ14409 553 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 ATP6AP1Q15904 470 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 ZNF672Q499Z4 452 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-222ENST00000478095 RPL13AP3Q6NVV1 102 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 LEG1Q6P5S2 330 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 TREML4Q6UXN2 200 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 AMIGO2Q86SJ2 522 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 ADCK1Q86TW2 530 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 CCDC36Q8IYA8 594 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 IQCF1Q8N6M8 205 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 ATG16L2Q8NAA4 619 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 SDR9C7Q8NEX9 313 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 OR4Q3Q8NH05 313 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 FNDC8Q8TC99 324 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 LRTOMTQ8WZ04 291 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 NABP1Q96AH0 204 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 TSSK2Q96PF2 358 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 KCNS3Q9BQ31 491 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 TSSK6Q9BXA6 273 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 NUAK2Q9H093 628 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 FN3KQ9H479 309 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 RNF121Q9H920 327 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 B3GNT2Q9NY97 397 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 CRNNQ9UBG3 495 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-222ENST00000478095 ATP23Q9Y6H3 246 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 POLQO75417 2590 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 APCP25054 2843 aa8.93□□□□□ -0.98
HDAC6-222ENST00000478095 CSMD1Q96PZ7 3565 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 ITPR2Q14571 2701 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 CACNA1DQ01668 2161 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 FAM171A2A8MVW0 826 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 E7EQL1 145 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 H3BN98 237 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 BHLHE40O14503 412 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 ARPC3O15145 178 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 GPANK1O95872 356 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 CRYAAP02489 173 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 SCG5P05408 212 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 CD53P19397 219 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 NPR2P20594 1047 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 DNASE1P24855 282 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 FASP25445 335 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 POU1F1P28069 291 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 LAP3P28838 519 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 ARR3P36575 388 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 CENPAP49450 140 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 ARHGDIAP52565 204 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 NAAAQ02083 359 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC6-222ENST00000478095 RAB39AQ14964 217 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 SLC36A3Q495N2 470 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 C1QTNF12Q5T7M4 302 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 SHQ1Q6PI26 577 aaKnown RBP8.92□□□□□ -0.98
HDAC6-222ENST00000478095 UGT2A3Q6UWM9 527 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-222ENST00000478095 DEPDC4Q8N2C3 294 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 OR52E2Q8NGJ4 325 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 FBXW5Q969U6 566 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 DUS3LQ96G46 650 aaKnown RBP8.92□□□□□ -0.98
HDAC6-222ENST00000478095 CCL19Q99731 98 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 SEMA6AQ9H2E6 1030 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 SIAEQ9HAT2 523 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 EMC7Q9NPA0 242 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 RPRD1BQ9NQG5 326 aaKnown RBP8.92□□□□□ -0.98
HDAC6-222ENST00000478095 IL20Q9NYY1 176 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 CISD1Q9NZ45 108 aaKnown RBP8.92□□□□□ -0.98
HDAC6-222ENST00000478095 VSX1Q9NZR4 365 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-222ENST00000478095 KIF17Q9P2E2 1029 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 REV1Q9UBZ9 1251 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 LAMP3Q9UQV4 416 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 ALPK2Q86TB3 2170 aa8.92□□□□□ -0.98
HDAC6-222ENST00000478095 PRR14LQ5THK1 2151 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms