RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 EME1Q96AY2 570 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 MBOAT4Q96T53 435 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 C9orf16Q9BUW7 83 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 DCLRE1BQ9H816 532 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 SLC25A19Q9HC21 320 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 EMC7Q9NPA0 242 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 STX18Q9P2W9 335 aaKnown RBP13.87□□□□□ -0.19
COPS3-207ENST00000477299 NDRG3Q9UGV2 375 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 NAV2Q8IVL1 2488 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 IGLV1-36A0A0B4J1U3 117 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 ZAR1LA6NP61 321 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 DEFB108AA8MXU0 73 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
COPS3-207ENST00000477299 SNAP29O95721 258 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 CELA3BP08861 270 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 PRF1P14222 555 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 ZNF83P51522 516 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 TGFBR3Q03167 851 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 PPA1Q15181 289 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 MEP1BQ16820 701 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 ZNF627Q7L945 461 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 BCDIN3DQ7Z5W3 292 aaKnown RBP13.86□□□□□ -0.19
COPS3-207ENST00000477299 ADCK1Q86TW2 530 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 C1orf162Q8NEQ5 155 aaPredicted RBP13.86□□□□□ -0.19
COPS3-207ENST00000477299 BBS1Q8NFJ9 593 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 DNAJC9Q8WXX5 260 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 HSD17B8Q92506 261 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 PTP4A1Q93096 173 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 UBE2FQ969M7 185 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 BOD1Q96IK1 185 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 DACH2Q96NX9 599 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 HS3ST6Q96QI5 342 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 NMNAT2Q9BZQ4 307 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 CMC2Q9NRP2 79 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 B3GNT2Q9NY97 397 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 TVP23BQ9NYZ1 205 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 HRNRQ86YZ3 2850 aaPredicted RBP13.86□□□□□ -0.19
COPS3-207ENST00000477299 ROS1P08922 2347 aa13.86□□□□□ -0.19
COPS3-207ENST00000477299 DCHS2Q6V1P9 2916 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 A0A1W2PPR1 153 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 DPRXA6NFQ7 191 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 E9PQ18 207 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 H0YHG0 523 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 SURF4O15260 269 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 PRKYO43930 277 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 PLAUP00749 431 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 RENP00797 406 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 LAP3P28838 519 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 CAPZA2P47755 286 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 CENPAP49450 140 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 ZNF84P51523 738 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 SH3BGRP55822 239 aaPredicted RBP13.85□□□□□ -0.19
COPS3-207ENST00000477299 ESRRGP62508 458 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 SLX4IPQ5VYV7 408 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 B3GLCTQ6Y288 498 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 FOXL2NBQ6ZUU3 175 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.85□□□□□ -0.19
COPS3-207ENST00000477299 MDP1Q86V88 176 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 FAM222BQ8WU58 562 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 MARVELD3Q96A59 401 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 GABARAPL3Q9BY60 117 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 OR10A4Q9H209 315 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 TOR3AQ9H497 397 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 HINT3Q9NQE9 182 aaKnown RBP13.85□□□□□ -0.19
COPS3-207ENST00000477299 AASSQ9UDR5 926 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 KLHL21Q9UJP4 597 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 BAIAP2Q9UQB8 552 aa13.85□□□□□ -0.19
COPS3-207ENST00000477299 TVP23AA6NH52 213 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 AHCYL1O43865 530 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 MGRN1O60291 552 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 KHDRBS3O75525 346 aaKnown RBP13.84□□□□□ -0.19
COPS3-207ENST00000477299 TFP02787 698 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 PSKH1P11801 424 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 CD79AP11912 226 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 PPP3CBP16298 524 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 CRYGSP22914 178 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 KRTAP10-9P60411 292 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 MRPS34P82930 218 aaKnown RBP13.84□□□□□ -0.19
COPS3-207ENST00000477299 ENDOGQ14249 297 aaKnown RBP13.84□□□□□ -0.19
COPS3-207ENST00000477299 OGFRL1Q5TC84 451 aaPredicted RBP13.84□□□□□ -0.19
COPS3-207ENST00000477299 C12orf73Q69YU5 71 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 PLBD1Q6P4A8 553 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 ZBTB46Q86UZ6 589 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 CPOQ8IVL8 374 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 C11orf40Q8WZ69 217 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 OTULINQ96BN8 352 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 MUCL1Q96DR8 90 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 FBXO17Q96EF6 278 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 PLPPR2Q96GM1 343 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 ZNF75AQ96N20 296 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 SNX18Q96RF0 628 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 ZNF416Q9BWM5 594 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 RNPEPL1Q9HAU8 725 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 POLE4Q9NR33 117 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 RRP15Q9Y3B9 282 aaKnown RBP13.84□□□□□ -0.19
COPS3-207ENST00000477299 CELSR2Q9HCU4 2923 aa13.84□□□□□ -0.19
COPS3-207ENST00000477299 ARPC4-TTLL3A0A0A6YYG9 625 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.83□□□□□ -0.2
COPS3-207ENST00000477299 RIIAD1A6NNX1 92 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 CASKO14936 926 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms