RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 SDHAP31040 664 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 THBS4P35443 961 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 HMGA2P52926 109 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 SNTB2Q13425 540 aaKnown RBP17.47■□□□□ 0.39
HLA-B-252ENST00000474381 VHLLQ6RSH7 139 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 DPY19L2P2Q6ZN68 376 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 FOXL2NBQ6ZUU3 175 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 ZER1Q7Z7L7 766 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 ZNF584Q8IVC4 421 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 Q96M85 177 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 ZNF570Q96NI8 536 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 PLK3Q9H4B4 646 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 RNF121Q9H920 327 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 PLCE1Q9P212 2302 aa17.47■□□□□ 0.39
HLA-B-252ENST00000474381 FLNAP21333 2647 aaKnown RBP17.46■□□□□ 0.39
HLA-B-252ENST00000474381 MMP7P09237 267 aaPredicted RBP17.46■□□□□ 0.39
HLA-B-252ENST00000474381 APEHP13798 732 aaKnown RBP17.46■□□□□ 0.39
HLA-B-252ENST00000474381 FPR3P25089 353 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 GUCA1AP43080 201 aaPredicted RBP17.46■□□□□ 0.39
HLA-B-252ENST00000474381 NUDT6P53370 316 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 FXYD6P3P58550 94 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 DSCR9P59020 149 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 GALK2Q01415 458 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 PLP2Q04941 152 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 TNK1Q13470 666 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 FAM27BQ5VT28 67 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 SMARCD3Q6STE5 483 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 ADCK1Q86TW2 530 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 CIARTQ8N365 385 aaPredicted RBP17.46■□□□□ 0.39
HLA-B-252ENST00000474381 LINC00471Q8N535 108 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 NSMAFQ92636 917 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 HTRA1Q92743 480 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 GPA33Q99795 319 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 SLC7A8Q9UHI5 535 aa17.46■□□□□ 0.39
HLA-B-252ENST00000474381 SLC22A23A1A5C7 686 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 PRSS37A4D1T9 235 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 OR10H3O60404 316 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 STAMBPO95630 424 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 SNAP29O95721 258 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 TXNDC12O95881 172 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 CDAP32320 146 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 GLRXP35754 106 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 PPOXP50336 477 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 EFNA4P52798 201 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 RIPPLY3P57055 190 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 RPS23P62266 143 aaKnown RBP17.45■□□□□ 0.38
HLA-B-252ENST00000474381 MS4A2Q01362 244 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 KRR1Q13601 381 aaKnown RBP17.45■□□□□ 0.38
HLA-B-252ENST00000474381 DNAL1Q4LDG9 190 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 MESTQ5EB52 335 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 KRT80Q6KB66 452 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 C1orf94Q6P1W5 598 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 THSD4Q6ZMP0 1018 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 LRRC18Q8N456 261 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 CLDN22Q8N7P3 220 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 SLC30A7Q8NEW0 376 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 OR1J2Q8NGS2 313 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 CMAHPQ9Y471 501 aa17.45■□□□□ 0.38
HLA-B-252ENST00000474381 TEX13CA0A0J9YWL9 993 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 IQCMA0A1B0GVH7 501 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 SSX4O60224 188 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 UBOX5O94941 541 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 CST2P09228 141 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 GSSP48637 474 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 EVX1P49640 407 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 RPS6KA3P51812 740 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 TRAP1Q12931 704 aaKnown RBP17.44■□□□□ 0.38
HLA-B-252ENST00000474381 SGCAQ16586 387 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 FAM98BQ52LJ0 330 aaKnown RBP17.44■□□□□ 0.38
HLA-B-252ENST00000474381 FANK1Q8TC84 345 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 WACQ9BTA9 647 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 THTPAQ9BU02 230 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 TRIM15Q9C019 465 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 LRMDAQ9H2I8 198 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 CCNB1IP1Q9NPC3 277 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 LYVE1Q9Y5Y7 322 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 FKBP7Q9Y680 259 aa17.44■□□□□ 0.38
HLA-B-252ENST00000474381 IMPA2O14732 288 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 ACOT8O14734 319 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 F12P00748 615 aaPredicted RBP17.43■□□□□ 0.38
HLA-B-252ENST00000474381 CSF3P09919 207 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 HOXB6P17509 224 aaKnown RBP17.43■□□□□ 0.38
HLA-B-252ENST00000474381 MSR1P21757 451 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 SLC6A6P31641 620 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 PCBD1P61457 104 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 HSF2Q03933 536 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 TSPAN31Q12999 210 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 TBC1D28Q2M2D7 210 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 RFX4Q33E94 735 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 CLEC2AQ6UVW9 174 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 SYT9Q86SS6 491 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 GNPDA2Q8TDQ7 276 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 CCDC124Q96CT7 223 aaKnown RBP17.43■□□□□ 0.38
HLA-B-252ENST00000474381 LRGUKQ96M69 825 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 DOK1Q99704 481 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 RHNO1Q9BSD3 238 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 OR52D1Q9H346 318 aa17.43■□□□□ 0.38
HLA-B-252ENST00000474381 GSX1Q9H4S2 264 aaPredicted RBP17.43■□□□□ 0.38
HLA-B-252ENST00000474381 VSX1Q9NZR4 365 aaPredicted RBP17.43■□□□□ 0.38
HLA-B-252ENST00000474381 IL20RAQ9UHF4 553 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms