RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 LRRC18Q8N456 261 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 ARIH2OSQ8N7S6 290 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 OR1J2Q8NGS2 313 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 ZNF519Q8TB69 540 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 NSMAFQ92636 917 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 MRPL24Q96A35 216 aaKnown RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 NABP1Q96AH0 204 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 PYURFQ96I23 114 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 FOXN4Q96NZ1 517 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 TSPAN32Q96QS1 320 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 CCT8L2Q96SF2 557 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 KCNN2Q9H2S1 579 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 C1orf198Q9H425 327 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 DYNLRB1Q9NP97 96 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 MYOZ1Q9NP98 299 aaPredicted RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 NDE1Q9NXR1 346 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 GRHPRQ9UBQ7 328 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 SLC7A8Q9UHI5 535 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 MAGEL2Q9UJ55 1249 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 IGKV1D-43A0A0B4J1Z2 117 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 IQCMA0A1B0GVH7 501 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 SLC22A23A1A5C7 686 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 VWC2LB2RUY7 222 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 SYNGR3O43761 229 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 TLX2O43763 284 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CD5LO43866 347 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 PTP4A3O75365 173 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 DIRAS1O95057 198 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CD14P08571 375 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 IGFBP1P08833 259 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 ADRA2AP08913 450 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CCL2P13500 99 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 ZNF26P17031 533 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 USF1P22415 310 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 GUCA1AP43080 201 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 SMIM11AP58511 58 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 MXRA7P84157 204 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 MSMPQ1L6U9 139 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 IQCCQ4KMZ1 466 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 DEFB107AQ8IZN7 70 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 PAQR4Q8N4S7 273 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CLDN22Q8N7P3 220 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CPEB3Q8NE35 698 aaKnown RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 OR52J3Q8NH60 311 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 NEU4Q8WWR8 484 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 FAM46AQ96IP4 442 aaKnown RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 MRPL37Q9BZE1 423 aaKnown RBP9.63□□□□□ -0.87
CKS1B-206ENST00000474215 NDEL1Q9GZM8 345 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 LRMDAQ9H2I8 198 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 MS4A5Q9H3V2 200 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CDH20Q9HBT6 801 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CCNB1IP1Q9NPC3 277 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 REV1Q9UBZ9 1251 aa9.63□□□□□ -0.87
CKS1B-206ENST00000474215 CSPG4Q6UVK1 2322 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 TRBV4-1A0A0J9YWV2 114 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 DYNC1I1O14576 645 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 XKRYO14609 159 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 ARPC2O15144 300 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 AHCYL1O43865 530 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 SNAP29O95721 258 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 SEMG1P04279 462 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 DAOP14920 347 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 APEX1P27695 318 aaKnown RBP9.62□□□□□ -0.87
CKS1B-206ENST00000474215 RAD52P43351 418 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 NR4A2P43354 598 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 OMPP47874 163 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 LIMS1P48059 325 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 UCP2P55851 309 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 HSF2Q03933 536 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 SEC23BQ15437 767 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 CARTPTQ16568 116 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 TBC1D28Q2M2D7 210 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 TMEM249Q2WGJ8 235 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 PABPC1L2AQ5JQF8 200 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 FOXL2NBQ6ZUU3 175 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 LRP11Q86VZ4 500 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 FITM2Q8N6M3 262 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 ZNF540Q8NDQ6 660 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 MCUR1Q96AQ8 359 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 DHRS1Q96LJ7 313 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 Q96M85 177 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 NSMCE2Q96MF7 247 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 SYT3Q9BQG1 590 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 PIMREGQ9BSJ6 248 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 FUZQ9BT04 418 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 YAE1D1Q9NRH1 226 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 DUSP13Q9UII6 198 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 ADAM21Q9UKJ8 722 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 SIGLEC7Q9Y286 467 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 ADAM18Q9Y3Q7 739 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 V9GYQ6 96 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 TLN2Q9Y4G6 2542 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 HIVEP2P31629 2446 aa9.62□□□□□ -0.87
CKS1B-206ENST00000474215 FN1P02751 2386 aaKnown RBP9.61□□□□□ -0.87
CKS1B-206ENST00000474215 UNC119BA6NIH7 251 aa9.61□□□□□ -0.87
CKS1B-206ENST00000474215 B2RBV5 119 aa9.61□□□□□ -0.87
CKS1B-206ENST00000474215 M0R233 179 aa9.61□□□□□ -0.87
CKS1B-206ENST00000474215 CRLF1O75462 422 aa9.61□□□□□ -0.87
CKS1B-206ENST00000474215 NDUFB2O95178 105 aa9.61□□□□□ -0.87
CKS1B-206ENST00000474215 GADD45GO95257 159 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms