RNA–Protein interactions for RNA: ENST00000472897.5

RBM3-205, Transcript of RNA binding motif protein 3, human

TSL 5

Gene RBM3, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-205	ENST00000472897	CD3E	P07766	207 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	CD40	P25942	277 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	POU1F1	P28069	291 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	CDA	P32320	146 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	GRK5	P34947	590 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	ZNF83	P51522	516 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	BSPH1	Q075Z2	132 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	GINS1	Q14691	196 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	ETFDH	Q16134	617 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	PGGHG	Q32M88	737 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	FBXW10	Q5XX13	1052 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	SLC16A14	Q7RTX9	510 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	ZBTB46	Q86UZ6	589 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	TMEM200A	Q86VY9	491 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	CDC20B	Q86Y33	519 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	PQLC1	Q8N2U9	271 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	ICA1L	Q8NDH6	482 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	SLC38A2	Q96QD8	506 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	HS3ST6	Q96QI5	342 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	SH3GL3	Q99963	347 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	RBM4B	Q9BQ04	359 aa	Known RBP	13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	RBM4	Q9BWF3	364 aa	Known RBP	13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	C1QTNF6	Q9BXI9	259 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	CMC2	Q9NRP2	79 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	KRT84	Q9NSB2	600 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	ENOPH1	Q9UHY7	261 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	FBXL3	Q9UKT7	428 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	B9D1	Q9UPM9	204 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	FKBP7	Q9Y680	259 aa		13.69	□□□□□ -0.22
RBM3-205	ENST00000472897	OR6C68	A6NDL8	312 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	ZNF503-AS2	A6NEH8	195 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	IFNG	P01579	166 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	HMGN1	P05114	100 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	CD79A	P11912	226 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	LAP3	P28838	519 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	CAPZA2	P47755	286 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	CRISP1	P54107	249 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	RAB1A	P62820	205 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	TUBA1B	P68363	451 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	TUBA4A	P68366	448 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	PPP2R2B	Q00005	443 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SGCA	Q16586	387 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	GSG1	Q2KHT4	349 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SLC36A2	Q495M3	483 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	ACSM5	Q6NUN0	579 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	ADAM5	Q6NVV9	412 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	TUBA1A	Q71U36	451 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SYT9	Q86SS6	491 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	MDP1	Q86V88	176 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	GLB1L2	Q8IW92	636 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	OR6V1	Q8N148	313 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SLC37A3	Q8NCC5	494 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SDR9C7	Q8NEX9	313 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	IL17RD	Q8NFM7	739 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	ZNF75A	Q96N20	296 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	TEX12	Q9BXU0	123 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	RACGAP1	Q9H0H5	632 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	KCNN2	Q9H2S1	579 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	PLEKHF2	Q9H8W4	249 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SEC61A2	Q9H9S3	476 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SLC25A19	Q9HC21	320 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	SRA1	Q9HD15	236 aa	Known RBP	13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	POLE4	Q9NR33	117 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	RNF115	Q9Y4L5	304 aa		13.68	□□□□□ -0.22
RBM3-205	ENST00000472897	LRBA	P50851	2863 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	CSMD1	Q96PZ7	3565 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	IGLV1-36	A0A0B4J1U3	117 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	IGHV1-18	A0A0C4DH31	117 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897		A0A1W2PPR1	153 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	ERICH4	A6NGS2	130 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	SAC3D1	A6NKF1	404 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897		M0R1B8	84 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	CST2	P09228	141 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	MMP7	P09237	267 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	MSR1	P21757	451 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	PTDSS1	P48651	473 aa	Known RBP	13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	SLC25A1	P53007	311 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	KRTAP10-9	P60411	292 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	LSM6	P62312	80 aa	Known RBP	13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	KCNMB1	Q16558	191 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	TMEM53	Q6P2H8	277 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	FGFBP3	Q8TAT2	258 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	TSSK2	Q96PF2	358 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	RPRD1B	Q9NQG5	326 aa	Known RBP	13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	USE1	Q9NZ43	259 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	COA3	Q9Y2R0	106 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM3-205	ENST00000472897	AKAP9	Q99996	3911 aa		13.67	□□□□□ -0.22
RBM3-205	ENST00000472897		A0A1W2PPL8	197 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	RIIAD1	A6NNX1	92 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	DCTN6	O00399	190 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	RAB36	O95755	333 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	SCG5	P05408	212 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	ZNF14	P17017	642 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	IGFBP5	P24593	272 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	PCBD1	P61457	104 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	PIGF	Q07326	219 aa		13.66	□□□□□ -0.22
RBM3-205	ENST00000472897	DAG1	Q14118	895 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms