RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 C1QTNF6Q9BXI9 259 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 PLA2G12AQ9BZM1 189 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 SYT4Q9H2B2 425 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 PLEKHF2Q9H8W4 249 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 B3GNT2Q9NY97 397 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 ENOPH1Q9UHY7 261 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 UGT2A1Q9Y4X1 527 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 POLQO75417 2590 aa13.18□□□□□ -0.3
SNX13-205ENST00000471744 IGKV1D-43A0A0B4J1Z2 117 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 ABCD4O14678 606 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 SLC16A7O60669 478 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 IFNGP01579 166 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 HLA-HP01893 362 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 TP53P04637 393 aaPredicted RBP13.17□□□□□ -0.3
SNX13-205ENST00000471744 MSR1P21757 451 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 PRKACGP22612 351 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 CDKN2AP42771 156 aaKnown RBP13.17□□□□□ -0.3
SNX13-205ENST00000471744 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 TUBA1BP68363 451 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 TUBA4AP68366 448 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 SLC36A3Q495N2 470 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 FAM27BQ5VT28 67 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 LEG1Q6P5S2 330 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 C20orf204Q6ZNR8 217 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 TUBA1AQ71U36 451 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 MDP1Q86V88 176 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 SKA3Q8IX90 412 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 PARP8Q8N3A8 854 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 OR8D4Q8NGM9 314 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 OR4K13Q8NH42 304 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 GABARAPL1Q9H0R8 117 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 C1orf198Q9H425 327 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 SEC61A2Q9H9S3 476 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 PAPOLBQ9NRJ5 636 aaKnown RBP13.17□□□□□ -0.3
SNX13-205ENST00000471744 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 DCHS2Q6V1P9 2916 aa13.17□□□□□ -0.3
SNX13-205ENST00000471744 IGHV1-18A0A0C4DH31 117 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 A0A1W2PPL8 197 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 A0A1W2PPR1 153 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 HS3ST1O14792 307 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 PTHP01270 115 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 CRYAAP02489 173 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 CST2P09228 141 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 CTLA4P16410 223 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 LAP3P28838 519 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 CDAP32320 146 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 GRK5P34947 590 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
SNX13-205ENST00000471744 IDH3GP51553 393 aaPredicted RBP13.16□□□□□ -0.3
SNX13-205ENST00000471744 PCBD1P61457 104 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 RAB1AP62820 205 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNX13-205ENST00000471744 SGCAQ16586 387 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 GLB1L2Q8IW92 636 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 OR52E2Q8NGJ4 325 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 NINJ1Q92982 152 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 STMN2Q93045 179 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 NABP1Q96AH0 204 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 NMNAT3Q96T66 252 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 NUAK2Q9H093 628 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 RACGAP1Q9H0H5 632 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 RNF121Q9H920 327 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 S100A14Q9HCY8 104 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 CCNB1IP1Q9NPC3 277 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 POLE4Q9NR33 117 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 ZNF224Q9NZL3 707 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 FKBP7Q9Y680 259 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 ARID1AO14497 2285 aa13.16□□□□□ -0.3
SNX13-205ENST00000471744 CREBBPQ92793 2442 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 CCDC168Q8NDH2 2452 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 ZNF503-AS2A6NEH8 195 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 C12orf71A8MTZ7 269 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 SHISA9B4DS77 424 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 H3BNX3 289 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 HMGN1P05114 100 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 CECR9P0C854 216 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 ZNF3P17036 446 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 POU1F1P28069 291 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 GIPRP48546 466 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 ESRRGP62508 458 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 NAAAQ02083 359 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 GLO1Q04760 184 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 PLP2Q04941 152 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 NPRL3Q12980 569 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 ZNF672Q499Z4 452 aaPredicted RBP13.15□□□□□ -0.3
SNX13-205ENST00000471744 SLC35F1Q5T1Q4 408 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
SNX13-205ENST00000471744 PAMR1Q6UXH9 720 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 SYT9Q86SS6 491 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 CDH24Q86UP0 819 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 LRRC18Q8N456 261 aa13.15□□□□□ -0.3
SNX13-205ENST00000471744 NPEPL1Q8NDH3 523 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms