RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 CHN2P52757 468 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 UCP2P55851 309 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 CTXN1P60606 82 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 RAP1BP61224 184 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 RAP1AP62834 184 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 MRPS11P82912 194 aaKnown RBP12.85□□□□□ -0.35
VPS8-221ENST00000471655 FAM27BQ5VT28 67 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 FAM166AQ6J272 317 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 RGS7BPQ6MZT1 257 aaPredicted RBP12.85□□□□□ -0.35
VPS8-221ENST00000471655 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 TMPRSS11FQ6ZWK6 438 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 MBOAT2Q6ZWT7 520 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 OAFQ86UD1 273 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 LRP11Q86VZ4 500 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 PAQR4Q8N4S7 273 aaPredicted RBP12.85□□□□□ -0.35
VPS8-221ENST00000471655 ZNF519Q8TB69 540 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 MSI2Q96DH6 328 aaKnown RBP12.85□□□□□ -0.35
VPS8-221ENST00000471655 HSH2DQ96JZ2 352 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 KCTD14Q9BQ13 255 aaPredicted RBP12.85□□□□□ -0.35
VPS8-221ENST00000471655 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 GPR160Q9UJ42 338 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 RPS6KA6Q9UK32 745 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 ENPP4Q9Y6X5 453 aa12.85□□□□□ -0.35
VPS8-221ENST00000471655 IGKV1D-43A0A0B4J1Z2 117 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 LOC100289279A0A1B0GTE1 492 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 EFCAB9A8MZ26 197 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 AHCYL1O43865 530 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 LILRA1O75019 489 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 CDAP32320 146 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 THBS2P35442 1172 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 SELENOVP59797 346 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 PSME3P61289 254 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 FMODQ06828 376 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 CD47Q08722 323 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 ELFN2Q5R3F8 820 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 UGT2A3Q6UWM9 527 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 ZNF730Q6ZMV8 503 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 TSEN54Q7Z6J9 526 aaKnown RBP12.84□□□□□ -0.35
VPS8-221ENST00000471655 CYP4Z1Q86W10 505 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 LRRC18Q8N456 261 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 CPEB3Q8NE35 698 aaKnown RBP12.84□□□□□ -0.35
VPS8-221ENST00000471655 OR51A7Q8NH64 312 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 C11orf40Q8WZ69 217 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 FAM162AQ96A26 154 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 C1orf159Q96HA4 380 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 WACQ9BTA9 647 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 BEX2Q9BXY8 128 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 TPK1Q9H3S4 243 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
VPS8-221ENST00000471655 CCNB1IP1Q9NPC3 277 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 SPAG4Q9NPE6 437 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 MYEF2Q9P2K5 600 aaKnown RBP12.84□□□□□ -0.35
VPS8-221ENST00000471655 DUSP13Q9UII6 198 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 KCNS2Q9ULS6 477 aa12.84□□□□□ -0.35
VPS8-221ENST00000471655 FBN1P35555 2871 aaKnown RBP12.84□□□□□ -0.35
VPS8-221ENST00000471655 TRAV27A0A087WT01 109 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 A0A1W2PRQ8 180 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 SNX3O60493 162 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 CST2P09228 141 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 FAM157BP0CG42 384 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 CCL2P13500 99 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 APLNRP35414 380 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 SEC24CP53992 1094 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 KLF3P57682 345 aaPredicted RBP12.83□□□□□ -0.36
VPS8-221ENST00000471655 HSF2Q03933 536 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 TOP3AQ13472 1001 aaPredicted RBP12.83□□□□□ -0.36
VPS8-221ENST00000471655 DGCR6Q14129 220 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 SGCAQ16586 387 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 MOGQ16653 247 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 ZBED5Q49AG3 693 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 PABPC1L2AQ5JQF8 200 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
VPS8-221ENST00000471655 RRM2BQ7LG56 351 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 C1orf174Q8IYL3 243 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 ARIH2OSQ8N7S6 290 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 SPATA3Q8NHX4 192 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 SYNPRQ8TBG9 265 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 NSMAFQ92636 917 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 RDH5Q92781 318 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 POM121L2Q96KW2 1035 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 TSPAN32Q96QS1 320 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 SHARPINQ9H0F6 387 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 CHODLQ9H9P2 273 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 DCAF13Q9NV06 445 aaKnown RBP12.83□□□□□ -0.36
VPS8-221ENST00000471655 SLCO1C1Q9NYB5 712 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 NKIRAS2Q9NYR9 191 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 TMEM5Q9Y2B1 443 aa12.83□□□□□ -0.36
VPS8-221ENST00000471655 A0A1W2PPW3 197 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 CDC42EP2O14613 210 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 ICMTO60725 284 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 CD14P08571 375 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 NCK1P16333 377 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 ZNF32P17041 273 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 RHCEP18577 417 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 ACHEP22303 614 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 IGFBP5P24593 272 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 STOMP27105 288 aa12.82□□□□□ -0.36
VPS8-221ENST00000471655 APEX1P27695 318 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms