RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 NABP1Q96AH0 204 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 FOXC2Q99958 501 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 SH3GL3Q99963 347 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 KCNN2Q9H2S1 579 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 HEATR1Q9H583 2144 aaKnown RBP13.29□□□□□ -0.28
SDC3-203ENST00000471567 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
SDC3-203ENST00000471567 PDP1Q9P0J1 537 aaPredicted RBP13.29□□□□□ -0.28
SDC3-203ENST00000471567 POU2F3Q9UKI9 436 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 MOKQ9UQ07 419 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 AP4S1Q9Y587 144 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 CCDC168Q8NDH2 2452 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 E7EQL1 145 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 KHDRBS3O75525 346 aaKnown RBP13.28□□□□□ -0.28
SDC3-203ENST00000471567 DANCRP0C864 163 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 FCGR1AP12314 374 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 ANXA8P13928 327 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 ZNF14P17017 642 aaPredicted RBP13.28□□□□□ -0.28
SDC3-203ENST00000471567 NOS3P29474 1203 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 CDAP32320 146 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 CDKN2AP42771 156 aaKnown RBP13.28□□□□□ -0.28
SDC3-203ENST00000471567 GIPRP48546 466 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
SDC3-203ENST00000471567 NPRL3Q12980 569 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 ATP6AP1Q15904 470 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 SGCAQ16586 387 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 DEFB113Q30KQ7 82 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 ZNF544Q6NX49 715 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 SHQ1Q6PI26 577 aaKnown RBP13.28□□□□□ -0.28
SDC3-203ENST00000471567 PTCHD4Q6ZW05 846 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 YTHDF3Q7Z739 585 aaKnown RBP13.28□□□□□ -0.28
SDC3-203ENST00000471567 JAZF1Q86VZ6 243 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 OR4F15Q8NGB8 312 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 FGFBP3Q8TAT2 258 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 SMAP2Q8WU79 429 aaPredicted RBP13.28□□□□□ -0.28
SDC3-203ENST00000471567 IGFBPL1Q8WX77 278 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 CCL19Q99731 98 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 NIPSNAP1Q9BPW8 284 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 DHRS9Q9BPW9 319 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 WACQ9BTA9 647 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 GRIP2Q9C0E4 1043 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 SYT4Q9H2B2 425 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 RNF121Q9H920 327 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 SEC61A2Q9H9S3 476 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 NTN4Q9HB63 628 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 NOX3Q9HBY0 568 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 FAIMQ9NVQ4 179 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 BAIAP2Q9UQB8 552 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 ATP23Q9Y6H3 246 aa13.28□□□□□ -0.28
SDC3-203ENST00000471567 DSCAMO60469 2012 aa13.27□□□□□ -0.28
SDC3-203ENST00000471567 ATP6V1G2-DDX39BF2Z307 99 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 BHLHE40O14503 412 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 SLC16A7O60669 478 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 RENP00797 406 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 PTHP01270 115 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 SERPINA5P05154 406 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 CELA3BP08861 270 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 CST2P09228 141 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 MMP7P09237 267 aaPredicted RBP13.27□□□□□ -0.29
SDC3-203ENST00000471567 PATE4P0C8F1 98 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 HIST1H1CP16403 213 aaKnown RBP13.27□□□□□ -0.29
SDC3-203ENST00000471567 CTLA4P16410 223 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 MSR1P21757 451 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 FASP25445 335 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 CRABP1P29762 137 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 ACTR3P61158 418 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 PGGHGQ32M88 737 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 CLEC12AQ5QGZ9 265 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 DNM1P34Q6PK57 102 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 C10orf67Q8IYJ2 551 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 LNX2Q8N448 690 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 LRRC18Q8N456 261 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 OR8D4Q8NGM9 314 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 OR4K13Q8NH42 304 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 TMEM171Q8WVE6 324 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 HTRA1Q92743 480 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 BDH2Q9BUT1 245 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 TSSK6Q9BXA6 273 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 PLA2G12AQ9BZM1 189 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 C1orf198Q9H425 327 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 ZNF556Q9HAH1 456 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 CCNB1IP1Q9NPC3 277 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 POLE4Q9NR33 117 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 TBC1D23Q9NUY8 699 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 ITGB1BP2Q9UKP3 347 aa13.27□□□□□ -0.29
SDC3-203ENST00000471567 IGHV2OR16-5A0A0B4J2B6 119 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 A0A1W2PPL8 197 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 TP53P04637 393 aaPredicted RBP13.26□□□□□ -0.29
SDC3-203ENST00000471567 LAP3P28838 519 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 CALCRP30988 508 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 PCBD1P61457 104 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 PLP2Q04941 152 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 RAB39AQ14964 217 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 ETFDHQ16134 617 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 AGAP6Q5VW22 663 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 LEG1Q6P5S2 330 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 B3GLCTQ6Y288 498 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 SYT9Q86SS6 491 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 DTX2Q86UW9 622 aa13.26□□□□□ -0.29
SDC3-203ENST00000471567 MYPOPQ86VE0 399 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms