RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CPEB3Q8NE35 698 aaKnown RBP13.16□□□□□ -0.3
COL1A1-203ENST00000471344 OR51A7Q8NH64 312 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 RP9Q8TA86 221 aaKnown RBP13.16□□□□□ -0.3
COL1A1-203ENST00000471344 YIPF5Q969M3 257 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 SHARPINQ9H0F6 387 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 MYLK2Q9H1R3 596 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 TXNIPQ9H3M7 391 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 NARFLQ9H6Q4 476 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-203ENST00000471344 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 KCNS2Q9ULS6 477 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 AP3M1Q9Y2T2 418 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 H7C1C5 153 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 WNT9BO14905 357 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-203ENST00000471344 MGRN1O60291 552 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 SERPINA1P01009 418 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 TGFAP01135 160 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 IFNW1P05000 195 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 SAGP10523 405 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-203ENST00000471344 ZNF32P17041 273 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 MAGEB1P43366 347 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 GPR4P46093 362 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 NUDT2P50583 147 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 RPS23P62266 143 aaKnown RBP13.15□□□□□ -0.3
COL1A1-203ENST00000471344 LCN6P62502 163 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 GLO1Q04760 184 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 SLC36A2Q495M3 483 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 PABPC1L2AQ5JQF8 200 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 RGS7BPQ6MZT1 257 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-203ENST00000471344 SLC25A47Q6Q0C1 308 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 ARPINQ7Z6K5 226 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 AKR7LQ8NHP1 331 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 HSH2DQ96JZ2 352 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 CDH20Q9HBT6 801 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 TAAR3PQ9P1P4 343 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
COL1A1-203ENST00000471344 ANK2Q01484 3957 aa13.15□□□□□ -0.3
COL1A1-203ENST00000471344 A0A087WUU8 490 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 NPIPB13A6NJU9 1138 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 CENPBD1B2RD01 187 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 NPIPB4C9JG80 1138 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 IFNA2P01563 188 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 IGHMP01871 453 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 LCKP06239 509 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF26P17031 533 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-203ENST00000471344 WNT5AP41221 380 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 CTXN1P60606 82 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
COL1A1-203ENST00000471344 ERVK-25P63136 954 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 MRPS34P82930 218 aaKnown RBP13.14□□□□□ -0.31
COL1A1-203ENST00000471344 HSF2Q03933 536 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 SGCAQ16586 387 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 TBC1D28Q2M2D7 210 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 NRN1LQ496H8 165 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 SPATA46Q5T0L3 261 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 CBLL1Q75N03 491 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 HDDC2Q7Z4H3 204 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 CPLX4Q7Z7G2 160 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 GEMIN6Q8WXD5 167 aaKnown RBP13.14□□□□□ -0.31
COL1A1-203ENST00000471344 LZICQ8WZA0 190 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 FNDC11Q9BVV2 318 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 SIAEQ9HAT2 523 aa13.14□□□□□ -0.31
COL1A1-203ENST00000471344 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 EFCAB9A8MZ26 197 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 GSTA4O15217 222 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 ENTPD5O75356 428 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 SNAP29O95721 258 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 SCG5P05408 212 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF250P15622 560 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 SRD5A1P18405 259 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 CCNOP22674 350 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 CHN2P52757 468 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 UCP2P55851 309 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 PRKCDQ05655 676 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 HNRNPA0Q13151 305 aaKnown RBP13.13□□□□□ -0.31
COL1A1-203ENST00000471344 TRAM2Q15035 370 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 NKPD1Q17RQ9 610 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 CR1LQ2VPA4 569 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 IFI44LQ53G44 452 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 OTPQ5XKR4 325 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 FAM86B1Q8N7N1 296 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 WNT5BQ9H1J7 359 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 MS4A5Q9H3V2 200 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 SMURF2Q9HAU4 748 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF275Q9NSD4 429 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-203ENST00000471344 LPAR3Q9UBY5 353 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 ADAM18Q9Y3Q7 739 aa13.13□□□□□ -0.31
COL1A1-203ENST00000471344 IGLV3-9A0A075B6K5 115 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 A0A1W2PPL8 197 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 CCDC22O60826 627 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 RP2O75695 350 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms