RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 SSX4O60224 188 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 SEC14L2O76054 403 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 TXNDC12O95881 172 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 FPR3P25089 353 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 APLNRP35414 380 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 RUNX1T1Q06455 604 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 SNTB2Q13425 540 aaKnown RBP13.36□□□□□ -0.27
FDPS-208ENST00000470171 TNK1Q13470 666 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 FHL1Q13642 323 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 FAM98BQ52LJ0 330 aaKnown RBP13.36□□□□□ -0.27
FDPS-208ENST00000470171 LCN8Q6JVE9 175 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 DNM1P34Q6PK57 102 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 TBPL2Q6SJ96 375 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 SMARCD3Q6STE5 483 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 SLC30A7Q8NEW0 376 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 MRPL24Q96A35 216 aaKnown RBP13.36□□□□□ -0.27
FDPS-208ENST00000470171 TSPAN32Q96QS1 320 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 SNX18Q96RF0 628 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 DOK1Q99704 481 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 FUZQ9BT04 418 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 CDH20Q9HBT6 801 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 LOC390937A0A1W2PQ73 354 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 PRSS37A4D1T9 235 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 ZNF503-AS2A6NEH8 195 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 TRIM64A6NGJ6 449 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 TRIM64BA6NI03 449 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 UNC119BA6NIH7 251 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 CDC42EP2O14613 210 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 ARPC3O15145 178 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 SYNGR3O43761 229 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 TP53P04637 393 aaPredicted RBP13.35□□□□□ -0.27
FDPS-208ENST00000470171 CELA3BP08861 270 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 COX5BP10606 129 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 MSR1P21757 451 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 CRABP1P29762 137 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 RRM2P31350 389 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 THBS4P35443 961 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 MAGEA2P43356 314 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 SPIBQ01892 262 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 HSF2Q03933 536 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 TRAP1Q12931 704 aaKnown RBP13.35□□□□□ -0.27
FDPS-208ENST00000470171 TOP3AQ13472 1001 aaPredicted RBP13.35□□□□□ -0.27
FDPS-208ENST00000470171 RAB39AQ14964 217 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 KRTAP21-3Q3LHN1 58 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 DNAL1Q4LDG9 190 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 FAM209AQ5JX71 171 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 ZDHHC21Q8IVQ6 265 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 WDFY1Q8IWB7 410 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 OR13C2Q8NGS9 318 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 BCAS4Q8TDM0 211 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 FAM168AQ92567 244 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 FAM46AQ96IP4 442 aaKnown RBP13.35□□□□□ -0.27
FDPS-208ENST00000470171 RSRC1Q96IZ7 334 aaKnown RBP13.35□□□□□ -0.27
FDPS-208ENST00000470171 LRGUKQ96M69 825 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 SH3GL3Q99963 347 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 SLCO1C1Q9NYB5 712 aa13.35□□□□□ -0.27
FDPS-208ENST00000470171 EIF3KQ9UBQ5 218 aaKnown RBP13.35□□□□□ -0.27
FDPS-208ENST00000470171 MTORP42345 2549 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 H3BSA7 217 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 OR10H3O60404 316 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 MT-ND5P03915 603 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 MMP7P09237 267 aaPredicted RBP13.34□□□□□ -0.27
FDPS-208ENST00000470171 SLC6A6P31641 620 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 GPR4P46093 362 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 PDLIM4P50479 330 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 LSM6P62312 80 aaKnown RBP13.34□□□□□ -0.27
FDPS-208ENST00000470171 ERVK-25P63136 954 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 LOXL1Q08397 574 aaPredicted RBP13.34□□□□□ -0.27
FDPS-208ENST00000470171 RFX4Q33E94 735 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 C1orf94Q6P1W5 598 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 VHLLQ6RSH7 139 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 UGT2A3Q6UWM9 527 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 TRPM8Q7Z2W7 1104 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 FAM122BQ7Z309 247 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 GNPDA2Q8TDQ7 276 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 C11orf40Q8WZ69 217 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 COG8Q96MW5 612 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 VSX1Q9NZR4 365 aaPredicted RBP13.34□□□□□ -0.27
FDPS-208ENST00000470171 GDF2Q9UK05 429 aaPredicted RBP13.34□□□□□ -0.27
FDPS-208ENST00000470171 NDRG4Q9ULP0 352 aaKnown RBP13.34□□□□□ -0.27
FDPS-208ENST00000470171 UGT2A1Q9Y4X1 527 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 TEP1Q99973 2627 aaKnown RBP13.34□□□□□ -0.27
FDPS-208ENST00000470171 ROS1P08922 2347 aa13.34□□□□□ -0.27
FDPS-208ENST00000470171 TEX13CA0A0J9YWL9 993 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 TLX2O43763 284 aaPredicted RBP13.33□□□□□ -0.28
FDPS-208ENST00000470171 ICMTO60725 284 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.28
FDPS-208ENST00000470171 RASSF2P50749 326 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 MRPS11P82912 194 aaKnown RBP13.33□□□□□ -0.28
FDPS-208ENST00000470171 LSM11P83369 360 aaKnown RBP eCLIP13.33□□□□□ -0.283e-6■□□□□ 8.5
FDPS-208ENST00000470171 MYBPC1Q00872 1141 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 SCRN3Q0VDG4 424 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 TSPAN31Q12999 210 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 SGCAQ16586 387 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 KRT80Q6KB66 452 aa13.33□□□□□ -0.28
FDPS-208ENST00000470171 LSRQ86X29 649 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms