RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 IGKV1D-43A0A0B4J1Z2 117 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 TPD52L2O43399 206 aaKnown RBP11.33□□□□□ -0.6
CPSF4-210ENST00000469897 VENTXO95231 258 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 SNAP29O95721 258 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 IFNA14P01570 189 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
CPSF4-210ENST00000469897 ZNF32P17041 273 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 DRD4P21917 467 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 STOMP27105 288 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 CRYBB2P43320 205 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 DAP3P51398 398 aaKnown RBP11.33□□□□□ -0.6
CPSF4-210ENST00000469897 ZNF133P52736 654 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-210ENST00000469897 MRPS34P82930 218 aaKnown RBP11.33□□□□□ -0.6
CPSF4-210ENST00000469897 GLO1Q04760 184 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 FMODQ06828 376 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 KLF10Q13118 480 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 MOGQ16653 247 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 TSTQ16762 297 aaKnown RBP11.33□□□□□ -0.6
CPSF4-210ENST00000469897 PCGF3Q3KNV8 242 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 THEM4Q5T1C6 240 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 OR8J3Q8NGG0 315 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 OR51F2Q8NH61 342 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 SNX33Q8WV41 574 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 LIPHQ8WWY8 451 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 TPD52L3Q96J77 140 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 CCNB1IP1Q9NPC3 277 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 DECR2Q9NUI1 292 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 MED31Q9Y3C7 131 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 CACNG2Q9Y698 323 aa11.33□□□□□ -0.6
CPSF4-210ENST00000469897 LOC100509620A0A075B734 347 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 IGHV1-69-2A0A0G2JMI3 117 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 C5orf49A4QMS7 147 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 CENPBD1B2RD01 187 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 FXYD1O00168 92 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 MRASO14807 208 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 MGRN1O60291 552 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 NPPAP01160 153 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 TFP02787 698 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 TSPAN19P0C672 248 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 FUT4P22083 530 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 KDELR2P33947 212 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 YAP1P46937 504 aaKnown RBP11.32□□□□□ -0.6
CPSF4-210ENST00000469897 CYBRD1Q53TN4 286 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 ALG10Q5BKT4 473 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 SPATA46Q5T0L3 261 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 C10orf128Q5T292 105 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 THSD4Q6ZMP0 1018 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 CLDN22Q8N7P3 220 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 AKR7LQ8NHP1 331 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 NABP1Q96AH0 204 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
CPSF4-210ENST00000469897 POM121L2Q96KW2 1035 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 RBP7Q96R05 134 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 POLR2J2Q9GZM3 115 aaKnown RBP11.32□□□□□ -0.6
CPSF4-210ENST00000469897 POLR2J3Q9H1A7 115 aaKnown RBP11.32□□□□□ -0.6
CPSF4-210ENST00000469897 TXNIPQ9H3M7 391 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 NKIRAS2Q9NYR9 191 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 EIF3KQ9UBQ5 218 aaKnown RBP11.32□□□□□ -0.6
CPSF4-210ENST00000469897 GRIP1Q9Y3R0 1128 aa11.32□□□□□ -0.6
CPSF4-210ENST00000469897 SPRY3O43610 288 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 PLPP2O43688 288 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 PIP5K1CO60331 668 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 RGS9O75916 674 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-210ENST00000469897 AVPP01185 164 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 IGF2P01344 180 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 IGHV3-13P01766 116 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 THRBP10828 461 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 IFI30P13284 250 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ANPEPP15144 967 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 GCH1P30793 250 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 MPV17P39210 176 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 WNT5AP41221 380 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ZNF81P51508 661 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ARFIP2P53365 341 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ERVK-25P63136 954 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 SELENOWP63302 87 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 PSG4Q00888 419 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 CD47Q08722 323 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 TOP3AQ13472 1001 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ZNF718Q3SXZ3 478 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 LRRC23Q53EV4 343 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-210ENST00000469897 FAM27BQ5VT28 67 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ACSM5Q6NUN0 579 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 USP51Q70EK9 711 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 HDDC2Q7Z4H3 204 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 IGFN1Q86VF2 1251 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 MEX3DQ86XN8 651 aaKnown RBP11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-210ENST00000469897 OR51A7Q8NH64 312 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 BPIFA2Q96DR5 249 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 ZNF665Q9H7R5 613 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 VIPAS39Q9H9C1 493 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 SMURF2Q9HAU4 748 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 SAR1AQ9NR31 198 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 RHCGQ9UBD6 479 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 A4GNTQ9UNA3 340 aa11.31□□□□□ -0.6
CPSF4-210ENST00000469897 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms