RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PHOSPHO2Q8TCD6 241 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 RAB40AQ8WXH6 277 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 MRPL38Q96DV4 380 aaKnown RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 ZNF681Q96N22 645 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 EPHA6Q9UF33 1036 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 C13orf42A0A1B0GVH6 325 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 FITM1A5D6W6 292 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 WASH3PC4AMC7 463 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 XRCC3O43542 346 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 OR2T7P0C7T2 308 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 SMIM6P0DI80 62 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 CPT2P23786 658 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 MAPK3P27361 379 aaPredicted RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 CD34P28906 385 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 FAUP35544 74 aaKnown RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 RPL4P36578 427 aaKnown RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 INPP5JQ15735 1006 aaPredicted RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 MST1LQ2TV78 715 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 ARHGAP40Q5TG30 622 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 PRAMEF17Q5VTA0 474 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 Q7L0L9 218 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 DMRTC2Q8IXT2 367 aaPredicted RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 OR2T27Q8NH04 317 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 DTD2Q96FN9 168 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 CNTNAP3BQ96NU0 1288 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 DZANK1Q9NVP4 752 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 APOBEC3BQ9UH17 382 aaKnown RBP7.22□□□□□ -1.25
TPM3-215ENST00000469717 DTX4Q9Y2E6 619 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 PCDHGA1Q9Y5H4 931 aa7.22□□□□□ -1.25
TPM3-215ENST00000469717 A6NCN8 305 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 DCTN6O00399 190 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 ABLIM3O94929 683 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 HTR3BO95264 441 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 RAB3DO95716 219 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 ITGB2P05107 769 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 SKP2Q13309 424 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 SQSTM1Q13501 440 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 NKAPLQ5M9Q1 402 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 ABHD17CQ6PCB6 329 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 ZNF627Q7L945 461 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 RANBP3LQ86VV4 465 aaPredicted RBP7.21□□□□□ -1.25
TPM3-215ENST00000469717 DCUN1D3Q8IWE4 304 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 MOAP1Q96BY2 351 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 NRIP2Q9BQI9 281 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 SEMA6CQ9H3T2 930 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 CRLF2Q9HC73 371 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 COMMD9Q9P000 198 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 ICAM5Q9UMF0 924 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 CARHSP1Q9Y2V2 147 aaKnown RBP7.21□□□□□ -1.25
TPM3-215ENST00000469717 TMED7Q9Y3B3 224 aa7.21□□□□□ -1.25
TPM3-215ENST00000469717 SEC16AO15027 2179 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 OR52A4PA6NMU1 304 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 ACTA2P62736 377 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 ACTG2P63267 376 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 RNF4P78317 190 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 BTN3A2P78410 334 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 SRSF5Q13243 272 aaKnown RBP7.21□□□□□ -1.26
TPM3-215ENST00000469717 SMAD4Q13485 552 aaKnown RBP7.21□□□□□ -1.26
TPM3-215ENST00000469717 PPP1R1AQ13522 171 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 EIF2B1Q14232 305 aaKnown RBP7.21□□□□□ -1.26
TPM3-215ENST00000469717 EXOSC7Q15024 291 aaKnown RBP7.21□□□□□ -1.26
TPM3-215ENST00000469717 MOGAT2Q3SYC2 334 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 FAM76BQ5HYJ3 339 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 OR52W1Q6IF63 320 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 LRRC69Q6ZNQ3 347 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 ACOT7LQ6ZUV0 252 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 CDK20Q8IZL9 346 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 EID2Q8N6I1 236 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 OR5K2Q8NHB8 316 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 HIST1H2BAQ96A08 127 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 NECAB3Q96P71 396 aaPredicted RBP7.21□□□□□ -1.26
TPM3-215ENST00000469717 IP6K3Q96PC2 410 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 SLC6A7Q99884 636 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 SLC46A2Q9BY10 475 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 CST11Q9H112 138 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 ATG5Q9H1Y0 275 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 OR51M1Q9H341 326 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 MTHFD2LQ9H903 347 aaPredicted RBP7.21□□□□□ -1.26
TPM3-215ENST00000469717 VSIG4Q9Y279 399 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 A0A1B0GTI1 187 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 GXYLT2A0PJZ3 443 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 LILRB3O75022 631 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 WNT11O96014 354 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 CD8AP01732 235 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 OR8U8P0C7N1 319 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 SPI1P17947 270 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 RAB5BP61020 215 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 COTL1Q14019 142 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 PON3Q15166 354 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 MPPED2Q15777 294 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 KRBOX4Q5JUW0 171 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 C16orf54Q6UWD8 224 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 ZNF813Q6ZN06 617 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 TMPRSS11FQ6ZWK6 438 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 SYS1Q8N2H4 156 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 PAQR4Q8N4S7 273 aaPredicted RBP7.21□□□□□ -1.26
TPM3-215ENST00000469717 SEMA6DQ8NFY4 1073 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 OR1J4Q8NGS1 313 aa7.21□□□□□ -1.26
TPM3-215ENST00000469717 OR13C8Q8NGS7 320 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms