RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	CMC2	Q9NRP2	79 aa		11.97	□□□□□ -0.49
LMNA-210	ENST00000469565	VSX1	Q9NZR4	365 aa	Predicted RBP	11.97	□□□□□ -0.49
LMNA-210	ENST00000469565	COA3	Q9Y2R0	106 aa	Predicted RBP	11.97	□□□□□ -0.49
LMNA-210	ENST00000469565	FAM183A	A6NL82	134 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	ZAR1L	A6NP61	321 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565		M0R129	80 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	SURF4	O15260	269 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	B4GALT1	P15291	398 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	CTLA4	P16410	223 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	PAICS	P22234	425 aa	Known RBP	11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	CRABP1	P29762	137 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	CCKAR	P32238	428 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	KIR2DL3	P43628	341 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	UBE2N	P61088	152 aa	Known RBP	11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	SORD	Q00796	357 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	TBRG1	Q3YBR2	411 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	C10orf128	Q5T292	105 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	ANKRD16	Q6P6B7	361 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	DNM1P34	Q6PK57	102 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	WFDC8	Q8IUA0	241 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	LRRC18	Q8N456	261 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	BCL2L2	Q92843	193 aa	Predicted RBP	11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	NMD3	Q96D46	503 aa	Known RBP	11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	MUCL1	Q96DR8	90 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	MUS81	Q96NY9	551 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	SNX18	Q96RF0	628 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	GRIP2	Q9C0E4	1043 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	C8orf4	Q9NR00	106 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	TMEM38B	Q9NVV0	291 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	SMPD3	Q9NY59	655 aa	Predicted RBP	11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	B9D1	Q9UPM9	204 aa		11.96	□□□□□ -0.49
LMNA-210	ENST00000469565	SH3D21	A4FU49	640 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	PRR23D1	E9PI22	279 aa	Predicted RBP	11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	DCTN6	O00399	190 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	CASK	O14936	926 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	FARS2	O95363	451 aa	Known RBP	11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	GPANK1	O95872	356 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	HLA-DQA2	P01906	255 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	GYPB	P06028	91 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	OR8G3P	P0DMU2	310 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	PYCR1	P32322	319 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	TUBA1B	P68363	451 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	TUBA4A	P68366	448 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	KLHL12	Q53G59	568 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	SLX4IP	Q5VYV7	408 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	PLBD1	Q6P4A8	553 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	TUBA1A	Q71U36	451 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	OR6V1	Q8N148	313 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	SLC22A24	Q8N4F4	322 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	PACRGL	Q8N7B6	248 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	TCEANC	Q8N8B7	351 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	ZNF555	Q8NEP9	628 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	PROKR2	Q8NFJ6	384 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	OR51L1	Q8NGJ5	315 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	OR2T4	Q8NH00	348 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	NRG4	Q8WWG1	115 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	CYGB	Q8WWM9	190 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	IL4I1	Q96RQ9	567 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	MBOAT4	Q96T53	435 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	C1QTNF6	Q9BXI9	259 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	OR51V1	Q9H2C8	321 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	KCNN2	Q9H2S1	579 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	SLC17A5	Q9NRA2	495 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	GMPPB	Q9Y5P6	360 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	FKBP7	Q9Y680	259 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	RTTN	Q86VV8	2226 aa		11.95	□□□□□ -0.5
LMNA-210	ENST00000469565	OR5H1	A6NKK0	313 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	TLX2	O43763	284 aa	Predicted RBP	11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	PRKY	O43930	277 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	CLU	P10909	449 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	CD79A	P11912	226 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	COX6B1	P14854	86 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	PPP3CB	P16298	524 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	LAP3	P28838	519 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	PEX19	P40855	299 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	PCYT1A	P49585	367 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	ZNF133	P52736	654 aa	Predicted RBP	11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	CDC42	P60953	191 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	PIGF	Q07326	219 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	PPA1	Q15181	289 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	TAB1	Q15750	504 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	TIMM23B	Q5SRD1	257 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	OTP	Q5XKR4	325 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	C12orf73	Q69YU5	71 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	C22orf34	Q6ZV56	151 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	CXXC5	Q7LFL8	322 aa	Known RBP	11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	CPO	Q8IVL8	374 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	SKA3	Q8IX90	412 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	WDR31	Q8NA23	367 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	OR6K6	Q8NGW6	343 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	FAM81A	Q8TBF8	368 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	HSD17B8	Q92506	261 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	DDO	Q99489	341 aa		11.94	□□□□□ -0.5
LMNA-210	ENST00000469565	SH3GL3	Q99963	347 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms