RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 TFP02787 698 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 LIMS3P0CW19 117 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 LIMS4P0CW20 117 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 GLI4P10075 376 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 EDNRAP25101 427 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 PYCR1P32322 319 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 LCN6P62502 163 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 HIST1H3AP68431 136 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 MRPS34P82930 218 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 HSF2Q03933 536 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 FMODQ06828 376 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ST3GAL4Q11206 333 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 CAMK2DQ13557 499 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TBCEQ15813 527 aaPredicted RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ETFDHQ16134 617 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ZNF684Q5T5D7 378 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 HIST2H3PS2Q5TEC6 136 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 XAF1Q6GPH4 301 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 GFRALQ6UXV0 394 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 HIST2H3AQ71DI3 136 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 LINGO2Q7L985 606 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SLC16A9Q7RTY1 509 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 NUFIP2Q7Z417 695 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 CD163Q86VB7 1156 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 GLB1L2Q8IW92 636 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SPARTQ8N0X7 666 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SYT14Q8NB59 555 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TSPAN14Q8NG11 270 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 OR5M9Q8NGP3 310 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 OR6K3Q8NGY3 331 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 MYDGFQ969H8 173 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 NABP1Q96AH0 204 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TMEM80Q96HE8 168 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 COPS4Q9BT78 406 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 WACQ9BTA9 647 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 OR51V1Q9H2C8 321 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SLCO5A1Q9H2Y9 848 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 AMBNQ9NP70 447 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 PLSCR4Q9NRQ2 329 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 H2AFY2Q9P0M6 372 aaPredicted RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 NOSIPQ9Y314 301 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 LSM2Q9Y333 95 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 PHF3Q92576 2039 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 COL6A6A6NMZ7 2263 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TMEM129A0AVI4 362 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 PRRG2O14669 202 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ZNHIT1O43257 154 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 RGS10O43665 173 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SLC16A7O60669 478 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SLC19A2O60779 497 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 MRPL33O75394 65 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 UPK3AO75631 287 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SERPINI2O75830 405 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 FADS2O95864 444 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 MT-ND2P03891 347 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TFAP2AP05549 437 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 GYPBP06028 91 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 STSP08842 583 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 QDPRP09417 244 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 OR2T7P0C7T2 308 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 CD8BP10966 210 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ALOX5APP20292 161 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 LAP3P28838 519 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 C21orf33P30042 268 aaPredicted RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ALDH3B2P48448 385 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 CLRN1P58418 232 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 LSM6P62312 80 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 MVKQ03426 396 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 GLO1Q04760 184 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TSPO2Q5TGU0 170 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 PLXDC2Q6UX71 529 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TFAP2EQ6VUC0 442 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 RPTNQ6XPR3 784 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 AHSA2Q719I0 299 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 RHOUQ7L0Q8 258 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 CDC20BQ86Y33 519 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ACBD7Q8N6N7 88 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ZNF540Q8NDQ6 660 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 PROKR2Q8NFJ6 384 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 OR2T27Q8NH04 317 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ZMYND19Q96E35 227 aaPredicted RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TRIB1Q96RU8 372 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 CNN2Q99439 309 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 TTYH2Q9BSA4 534 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 PRRG4Q9BZD6 226 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 GPR35Q9HC97 309 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SRA1Q9HD15 236 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 POLE4Q9NR33 117 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SLC7A10Q9NS82 523 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 ERVK-18Q9QC07 812 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 EXOSC1Q9Y3B2 195 aaKnown RBP7.19□□□□□ -1.26
NPHP3-204ENST00000469232 COMMD3-BMI1R4GMX3 469 aa7.19□□□□□ -1.26
NPHP3-204ENST00000469232 SVILO95425 2214 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 E9PLN8 166 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 RAB36O95755 333 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 SCG5P05408 212 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 TPOP07202 933 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ABOP16442 354 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 COX5AP20674 150 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms