RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 PRSS50Q9UI38 385 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 FOXD3Q9UJU5 478 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 BLOC1S6Q9UL45 172 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 MOKQ9UQ07 419 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 HECTD1Q9ULT8 2610 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 PRRC2CQ9Y520 2896 aaKnown RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 ESPL1Q14674 2120 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 IRGMA1A4Y4 181 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 OR6C68A6NDL8 312 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 FAM171A2A8MVW0 826 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF99A8MXY4 864 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 FAM20BO75063 409 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 TMCC2O75069 709 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 RAD51DO75771 328 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 SEC14L2O76054 403 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 GLCEO94923 617 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 GNAO1P09471 354 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 RNF224P0DH78 156 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 B4GALT1P15291 398 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 CTLA4P16410 223 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 NPR2P20594 1047 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 MSR1P21757 451 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 MYF6P23409 242 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 LAP3P28838 519 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 GSTT1P30711 240 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 PYCR1P32322 319 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 UBE2NP61088 152 aaKnown RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ADAM8P78325 824 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 P2RY6Q15077 328 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 STK11Q15831 433 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 SGCAQ16586 387 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 C10orf128Q5T292 105 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 OR7E24Q6IFN5 339 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF813Q6ZN06 617 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ERI1Q8IV48 349 aaKnown RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF786Q8N393 782 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF610Q8N9Z0 462 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 OR51L1Q8NGJ5 315 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 OR2AJ1Q8NGZ0 328 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 CNIH3Q8TBE1 160 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ZMYND19Q96E35 227 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 MRPL48Q96GC5 212 aaKnown RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF582Q96NG8 517 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 TSSK2Q96PF2 358 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 PSMG3-AS1Q96PY0 264 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 INTS14Q96SY0 518 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 MYCBPQ99417 103 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 CNN2Q99439 309 aaKnown RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 MRPL13Q9BYD1 178 aaKnown RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 NELFAQ9H3P2 528 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 CCNB1IP1Q9NPC3 277 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 PLSCR4Q9NRQ2 329 aa7.16□□□□□ -1.26
HDAC6-216ENST00000468949 PLEKHB1Q9UF11 243 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 WARS2Q9UGM6 360 aaKnown RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 COA3Q9Y2R0 106 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 RPL36Q9Y3U8 105 aaKnown RBP7.16□□□□□ -1.26
HDAC6-216ENST00000468949 USP9XQ93008 2570 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 A1L4Q6 167 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 SH3D21A4FU49 640 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 WIPF3A6NGB9 483 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 C12orf71A8MTZ7 269 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ENTPD6O75354 484 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 LYZL6O75951 148 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 MRPL3P09001 348 aaKnown RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 SPARCP09486 303 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 OR8G3PP0DMU2 310 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 CLUP10909 449 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 EEF1B2P24534 225 aaKnown RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 HTR1FP30939 366 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 NAA10P41227 235 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 MTNR1AP48039 350 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 NUDT6P53370 316 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 PCBD1P61457 104 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 CSNK2BP67870 215 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ARF1P84077 181 aaKnown RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ADORA2A-AS1P86434 159 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 TEKQ02763 1124 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 TMED1Q13445 227 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 OCLNQ16625 522 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 HIST3H3Q16695 136 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 SLC36A2Q495M3 483 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ANKRD16Q6P6B7 361 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 XKRXQ6PP77 449 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 SLC25A47Q6Q0C1 308 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 USP51Q70EK9 711 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 MEPCEQ7L2J0 689 aaKnown RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 BHLHA15Q7RTS1 189 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 SLC16A14Q7RTX9 510 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 BCDIN3DQ7Z5W3 292 aaKnown RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ZBTB46Q86UZ6 589 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 CXorf67Q86X51 503 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 OR6V1Q8N148 313 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF808Q8N4W9 903 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 RELL2Q8NC24 303 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 C1orf162Q8NEQ5 155 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 BBS1Q8NFJ9 593 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 BPIFB6Q8NFQ5 453 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 STEAP2Q8NFT2 490 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 OR51G2Q8NGK0 314 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 OR6N2Q8NGY6 317 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms