RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TPM2P07951 284 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 GIPP09681 153 aaPredicted RBP3.41□□□□□ -1.86
LSM5-209ENST00000468872 SLC2A5P22732 501 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 ATP5C1P36542 298 aaKnown RBP3.41□□□□□ -1.86
LSM5-209ENST00000468872 FBXW4P57775 412 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 UNC119Q13432 240 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 IDI1Q13907 227 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 C6orf89Q6UWU4 347 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 ASCL5Q7RTU5 278 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 THOC6Q86W42 341 aaKnown RBP3.41□□□□□ -1.86
LSM5-209ENST00000468872 PUSL1Q8N0Z8 303 aaKnown RBP3.41□□□□□ -1.86
LSM5-209ENST00000468872 VN1R2Q8NFZ6 395 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 PLPPR1Q8TBJ4 325 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 ELSPBP1Q96BH3 223 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 HSFY1Q96LI6 401 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 INPP5EQ9NRR6 644 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 PSMC3IPQ9P2W1 217 aaPredicted RBP3.41□□□□□ -1.86
LSM5-209ENST00000468872 XCL2Q9UBD3 114 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 HTTP42858 3142 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 FYCO1Q9BQS8 1478 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 NOTCH2Q04721 2471 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 WDFY4Q6ZS81 3184 aa3.4□□□□□ -1.86
LSM5-209ENST00000468872 CTAGE15A4D2H0 777 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 ERVV-1B6SEH8 477 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 C2P06681 752 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 ZNF43P17038 809 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 TCN1P20061 433 aaPredicted RBP3.4□□□□□ -1.87
LSM5-209ENST00000468872 CHMLP26374 656 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 NUDT1P36639 197 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 SH3BGRP55822 239 aaPredicted RBP3.4□□□□□ -1.87
LSM5-209ENST00000468872 REG3AQ06141 175 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 TGFBIQ15582 683 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 C2orf83Q53S99 150 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 ARMC12Q5T9G4 340 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 ADAMTS13Q76LX8 1427 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 NIPA1Q7RTP0 329 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 CTAGE6Q86UF2 777 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 ZADH2Q8N4Q0 377 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 LINC01555Q8NAE3 123 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 OR2G2Q8NGZ5 317 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 SLC22A8Q8TCC7 542 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 PLIN2Q99541 437 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 NRTNQ99748 197 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 SH3GL1Q99961 368 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 HES7Q9BYE0 225 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.87
LSM5-209ENST00000468872 GLRX2Q9NS18 164 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 NYAP2Q9P242 653 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 STARD10Q9Y365 291 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 PAPPA2Q9BXP8 1791 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 ATP7BP35670 1465 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 DNAH12Q6ZR08 3092 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 SBF2Q86WG5 1849 aa3.4□□□□□ -1.87
LSM5-209ENST00000468872 INO80Q9ULG1 1556 aaPredicted RBP3.39□□□□□ -1.87
LSM5-209ENST00000468872 ERLIN2O94905 339 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 ALDOBP05062 364 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 IGHV4-34P06331 123 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 TDGF1P13385 188 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 RCC1P18754 421 aaPredicted RBP3.39□□□□□ -1.87
LSM5-209ENST00000468872 TNNI1P19237 187 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 IFNA8P32881 189 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 GPR6P46095 362 aaPredicted RBP3.39□□□□□ -1.87
LSM5-209ENST00000468872 TDGF1P3P51864 188 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 SRSF5Q13243 272 aaKnown RBP3.39□□□□□ -1.87
LSM5-209ENST00000468872 CUL2Q13617 745 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 FZD2Q14332 565 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 PPP1R7Q15435 360 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 HSP90AB3PQ58FF7 597 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 XKR7Q5GH72 579 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 PRAMEF20Q5VT98 475 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 LCN12Q6JVE5 192 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 CNIH2Q6PI25 160 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 COX15Q7KZN9 410 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 LHFPL3Q86UP9 236 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 FAM71E2Q8N5Q1 922 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 NPBQ8NG41 125 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 ACER1Q8TDN7 264 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 OR2M2Q96R28 347 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 ASB8Q9H765 288 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 EXD2Q9NVH0 621 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 CTNNA3Q9UI47 895 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 ZNF225Q9UK10 706 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 TP53TG5Q9Y2B4 290 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 TUBGCP6Q96RT7 1819 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 NALCNQ8IZF0 1738 aa3.39□□□□□ -1.87
LSM5-209ENST00000468872 IGKV1D-13A0A0B4J2D9 117 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 WI2-2373I1.2A0A1W2PRP0 233 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 H0Y9J4 135 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 RTL8CO15255 209 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 RNF13O43567 381 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 SOX15O60248 233 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 MGRN1O60291 552 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 PABPC4LP0CB38 370 aaKnown RBP3.38□□□□□ -1.87
LSM5-209ENST00000468872 IGKV1-13P0DP09 117 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 CRISP2P16562 243 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 TFPI2P48307 235 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 FGF8P55075 233 aaPredicted RBP3.38□□□□□ -1.87
LSM5-209ENST00000468872 LRRC10Q5BKY1 277 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 Q6ZSR3 168 aa3.38□□□□□ -1.87
LSM5-209ENST00000468872 KRTAP11-1Q8IUC1 163 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms