RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 OR10G3Q8NGC4 313 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 GCDHQ92947 438 aaPredicted RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 SGTBQ96EQ0 304 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 ZC3HAV1LQ96H79 300 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 C4orf36Q96KX1 117 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 IMMP1LQ96LU5 166 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 ZNF285Q96NJ3 590 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 DCLRE1CQ96SD1 692 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 SEC22CQ9BRL7 303 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 TMEM43Q9BTV4 400 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 FKBP14Q9NWM8 211 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 ASIC5Q9NY37 505 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 MYEF2Q9P2K5 600 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 SLC7A7Q9UM01 511 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 DIMT1Q9UNQ2 313 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 NOP16Q9Y3C1 178 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 NUBP2Q9Y5Y2 271 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 PCM1Q15154 2024 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 BLOC1S5-TXNDC5H3BN57 136 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 PDCD5O14737 125 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 MAGEB4O15481 346 aaPredicted RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 WDR1O75083 606 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 PPM1BO75688 479 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 RCBTB2O95199 551 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 MAS1P04201 325 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 GTF2F2P13984 249 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 PGCP20142 388 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 PTH2RP49190 550 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 WNT3P56703 355 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 EXOSC2Q13868 293 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 OPCMLQ14982 345 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 PON3Q15166 354 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 STK11Q15831 433 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 ZNF79Q15937 498 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 C3AR1Q16581 482 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 GGTA1PQ4G0N0 100 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 YIF1BQ5BJH7 314 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 CCNJQ5T5M9 372 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 OR2A2Q6IF42 318 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 KCTD9Q7L273 389 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 ZER1Q7Z7L7 766 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 JAZF1Q86VZ6 243 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 OR52E2Q8NGJ4 325 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 C16orf52Q8NHV5 167 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 RBPMSQ93062 196 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 UPRTQ96BW1 309 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 TRMT61AQ96FX7 289 aaKnown RBP5.42□□□□□ -1.54
SHQ1-205ENST00000468371 GNRHR2Q96P88 292 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 ARPC5LQ9BPX5 153 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 SPRY4Q9C004 299 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 ACOXLQ9NUZ1 547 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 BABAM2Q9NXR7 383 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 FLVCR2Q9UPI3 526 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 NTNG1Q9Y2I2 539 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 SLC6A5Q9Y345 797 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 MED31Q9Y3C7 131 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 CCL27Q9Y4X3 112 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 RTTNQ86VV8 2226 aa5.42□□□□□ -1.54
SHQ1-205ENST00000468371 TUBAL3A6NHL2 446 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 UNC119BA6NIH7 251 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 CDK2AP1O14519 115 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 GOSR2O14653 212 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 CLDN14O95500 239 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 CHRNB4P30926 498 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 GABRA4P48169 554 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 CEBPGP53567 150 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 ADAM8P78325 824 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 TAGLNQ01995 201 aaKnown RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 MPEG1Q2M385 716 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 WIPI1Q5MNZ9 446 aaPredicted RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 FAM122CQ6P4D5 195 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 APOOLQ6UXV4 268 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 MDGA2Q7Z553 956 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 LRRC28Q86X40 367 aaPredicted RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 ARMC10Q8N2F6 343 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 BBS1Q8NFJ9 593 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 INTS12Q96CB8 462 aaKnown RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 SLC41A3Q96GZ6 507 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 ADAD1Q96M93 576 aaKnown RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 GPR137Q96N19 417 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 POLDIP3Q9BY77 421 aaKnown RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 NXF5Q9H1B4 397 aaKnown RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 UBQLN4Q9NRR5 601 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 COPZ2Q9P299 210 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 EXO1Q9UQ84 846 aaKnown RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 V9GYH0 126 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 CACNA1DQ01668 2161 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 LOC102723996A0A087X1L8 192 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 A0A1B0GVI7 797 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 NME2P1O60361 137 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 TRIM3O75382 744 aaPredicted RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 PPP1R3DO95685 299 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 RAF1P04049 648 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 IFNA6P05013 189 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 NAGAP17050 411 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 NME2P22392 152 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 OPRM1P35372 400 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 EVX1P49640 407 aa5.41□□□□□ -1.54
SHQ1-205ENST00000468371 SNRPGP62308 76 aaKnown RBP5.41□□□□□ -1.54
SHQ1-205ENST00000468371 HSF1Q00613 529 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms