RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ETFDHQ16134 617 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 GABRA6Q16445 453 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 ZNF813Q6ZN06 617 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 FOXL2NBQ6ZUU3 175 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 CXXC5Q7LFL8 322 aaKnown RBP13.35□□□□□ -0.27
SNIP1-202ENST00000468040 SSX8Q7RTT4 187 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 CPOQ8IVL8 374 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 SETD9Q8NE22 299 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 OR9Q1Q8NGQ5 310 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 TSSK2Q96PF2 358 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 IL4I1Q96RQ9 567 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 ACTR6Q9GZN1 396 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 SEC61A2Q9H9S3 476 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 MOKQ9UQ07 419 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 COA3Q9Y2R0 106 aaPredicted RBP13.35□□□□□ -0.27
SNIP1-202ENST00000468040 OR5H1A6NKK0 313 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 M0R129 80 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 DCTN6O00399 190 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 B4GALT1P15291 398 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 LAP3P28838 519 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 CCKARP32238 428 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 SNRPGP62308 76 aaKnown RBP13.34□□□□□ -0.27
SNIP1-202ENST00000468040 TSC22D1Q15714 1073 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 TBRG1Q3YBR2 411 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 TIMM23BQ5SRD1 257 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 ZNF691Q5VV52 312 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 NXNL2Q5VZ03 156 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 GID4Q8IVV7 300 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 SLC22A24Q8N4F4 322 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 TFAP2CQ92754 450 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 BCL2L2Q92843 193 aaPredicted RBP13.34□□□□□ -0.27
SNIP1-202ENST00000468040 PTP4A1Q93096 173 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 S100PBPQ96BU1 408 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 HCAR1Q9BXC0 346 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 OR51V1Q9H2C8 321 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 NELFAQ9H3P2 528 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 SIAEQ9HAT2 523 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 OBP2BQ9NPH6 170 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 NPDC1Q9NQX5 325 aaPredicted RBP13.34□□□□□ -0.27
SNIP1-202ENST00000468040 POLE4Q9NR33 117 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 H2AFY2Q9P0M6 372 aaPredicted RBP13.34□□□□□ -0.27
SNIP1-202ENST00000468040 NDRG3Q9UGV2 375 aa13.34□□□□□ -0.27
SNIP1-202ENST00000468040 A0A096LPE4 126 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 A0A1W2PPZ6 126 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 SEC14L2O76054 403 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 HLA-DQA2P01906 255 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 GYPBP06028 91 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 CLUP10909 449 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 MSR1P21757 451 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 PAX7P23759 505 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 GRNP28799 593 aaKnown RBP13.33□□□□□ -0.28
SNIP1-202ENST00000468040 CDAP32320 146 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 PYCR1P32322 319 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 UBE2NP61088 152 aaKnown RBP13.33□□□□□ -0.28
SNIP1-202ENST00000468040 KLHL12Q53G59 568 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 SLC35D3Q5M8T2 416 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 SLC25A30Q5SVS4 291 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 FAM27BQ5VT28 67 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 MEDAGQ5VYS4 303 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 DPPA2Q7Z7J5 298 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 OR6K6Q8NGW6 343 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 NANOS1Q8WY41 292 aaKnown RBP13.33□□□□□ -0.28
SNIP1-202ENST00000468040 HSD17B8Q92506 261 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 NABP1Q96AH0 204 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 KCNN2Q9H2S1 579 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 MED20Q9H944 212 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 SLC17A5Q9NRA2 495 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 AMDHD2Q9Y303 409 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 HSPE1-MOB4S4R3N1 261 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 MYO18BQ8IUG5 2567 aa13.33□□□□□ -0.28
SNIP1-202ENST00000468040 ARPC4-TTLL3A0A0A6YYG9 625 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 TUBAL3A6NHL2 446 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 FAM171A2A8MVW0 826 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 GLCEO94923 617 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 HRGP04196 525 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 GAAP10253 952 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 FMO3P31513 532 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 RPS7P62081 194 aaKnown RBP13.32□□□□□ -0.28
SNIP1-202ENST00000468040 IL5RAQ01344 420 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 HSF2Q03933 536 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 KCNMB1Q16558 191 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 SGCAQ16586 387 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 SLC36A2Q495M3 483 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 HIKESHIQ53FT3 197 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 C6orf52Q5T4I8 152 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 LCN1P1Q5VSP4 162 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 AADACL4Q5VUY2 407 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 ENTHD1Q8IYW4 607 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 BBS1Q8NFJ9 593 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 SLC26A10Q8NG04 563 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 OR51L1Q8NGJ5 315 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 RFKQ969G6 155 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 MUCL1Q96DR8 90 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 Q96MT0 163 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 MOV10Q9HCE1 1003 aaKnown RBP13.32□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF226Q9NYT6 803 aa13.32□□□□□ -0.28
SNIP1-202ENST00000468040 CACNA1CQ13936 2221 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 HCFC1P51610 2035 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms