RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ACADSP16219 412 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 EPHA1P21709 976 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 PCMT1P22061 227 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 CCNOP22674 350 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 ERVK-25P63136 954 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 TOP3AQ13472 1001 aaPredicted RBP17.5■□□□□ 0.39
COL6A1-203ENST00000466285 PIN1Q13526 163 aaPredicted RBP17.5■□□□□ 0.39
COL6A1-203ENST00000466285 REP15Q6BDI9 236 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 TMEM154Q6P9G4 183 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 SHQ1Q6PI26 577 aaKnown RBP17.5■□□□□ 0.39
COL6A1-203ENST00000466285 CCDC80Q76M96 950 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 CALHM3Q86XJ0 350 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 DYDC1Q8WWB3 177 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 NSMAFQ92636 917 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 POM121L2Q96KW2 1035 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 ESM1Q9NQ30 184 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 MEGF8Q7Z7M0 2845 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 TRAV20A0A0B4J274 112 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 CRYBB2P43320 205 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 MMP15P51511 669 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 THEM4Q5T1C6 240 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 NANOGP8Q6NSW7 305 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 UGT2A3Q6UWM9 527 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 IGFN1Q86VF2 1251 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 SNX33Q8WV41 574 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 SGTBQ96EQ0 304 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 SLC6A7Q99884 636 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 POFUT1Q9H488 388 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 INIPQ9NRY2 104 aa17.49■□□□□ 0.39
COL6A1-203ENST00000466285 A0A1W2PRG6 482 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 SPRY3O43610 288 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 IGHV3-13P01766 116 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 HIST1H2ABP04908 130 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 ZNF84P51523 738 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 TAS2R41P59536 307 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 HILS1P60008 231 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 ACTG1P63261 375 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 MRPS34P82930 218 aaKnown RBP17.48■□□□□ 0.39
COL6A1-203ENST00000466285 HSF2Q03933 536 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 SF3A3Q12874 501 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL6A1-203ENST00000466285 LAPTM4AQ15012 233 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 HIST3H2AQ7L7L0 130 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 SLC25A40Q8TBP6 338 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 SLC26A7Q8TE54 656 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 GEMIN6Q8WXD5 167 aaKnown RBP17.48■□□□□ 0.39
COL6A1-203ENST00000466285 STON2Q8WXE9 905 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 C11orf40Q8WZ69 217 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 HIST1H2ACQ93077 130 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 MARS2Q96GW9 593 aaKnown RBP17.48■□□□□ 0.39
COL6A1-203ENST00000466285 WNT5BQ9H1J7 359 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 RABEP2Q9H5N1 569 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 SAP30LQ9HAJ7 183 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 NKIRAS2Q9NYR9 191 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 OPN4Q9UHM6 478 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 RIMS3Q9UJD0 308 aa17.48■□□□□ 0.39
COL6A1-203ENST00000466285 A0A0G2JND7 137 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 IQCMA0A1B0GVH7 501 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 WIPF1O43516 503 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 NGFP01138 241 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 SCG5P05408 212 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 STOMP27105 288 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 APLNRP35414 380 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 ARFIP2P53365 341 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 PSG4Q00888 419 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 PCGF3Q3KNV8 242 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 NRN1LQ496H8 165 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 OTPQ5XKR4 325 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 SLC25A47Q6Q0C1 308 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 C1QL2Q7Z5L3 287 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 PEG10Q86TG7 708 aaKnown RBP17.47■□□□□ 0.39
COL6A1-203ENST00000466285 MICU2Q8IYU8 434 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 TMEM239Q8WW34 195 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 C22orf15Q8WYQ4 148 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 BCL2L14Q9BZR8 327 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 OR2J1Q9GZK6 312 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 C1orf198Q9H425 327 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 INTS9Q9NV88 658 aaKnown RBP17.47■□□□□ 0.39
COL6A1-203ENST00000466285 SLCO1C1Q9NYB5 712 aa17.47■□□□□ 0.39
COL6A1-203ENST00000466285 SLC22A23A1A5C7 686 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 C5orf49A4QMS7 147 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 CLDN25C9JDP6 229 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 EDF1O60869 148 aaKnown RBP17.46■□□□□ 0.39
COL6A1-203ENST00000466285 OR5F1O95221 314 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 FSHBP01225 129 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 DAP3P51398 398 aaKnown RBP17.46■□□□□ 0.39
COL6A1-203ENST00000466285 ZNF81P51508 661 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 CD47Q08722 323 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 FHL1Q13642 323 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 SGCAQ16586 387 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 ACSM5Q6NUN0 579 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 SLC30A8Q8IWU4 369 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 MAGEB18Q96M61 343 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 SIAEQ9HAT2 523 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 PCDHB10Q9UN67 800 aa17.46■□□□□ 0.39
COL6A1-203ENST00000466285 MGAM2Q2M2H8 2515 aa17.46■□□□□ 0.38
COL6A1-203ENST00000466285 A0A0A6YYJ9 748 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 H7C1C5 153 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 TPD52L2O43399 206 aaKnown RBP17.45■□□□□ 0.38
COL6A1-203ENST00000466285 UBOX5O94941 541 aa17.45■□□□□ 0.38
COL6A1-203ENST00000466285 LAP3P28838 519 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms