RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 AQP6Q13520 282 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 RFX4Q33E94 735 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 CCDC183Q5T5S1 534 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 FBXL13Q8NEE6 735 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 B3GNT7Q8NFL0 401 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 OR56B2PQ8NGI1 322 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 OR1S2Q8NGQ3 325 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 OR2G2Q8NGZ5 317 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 CD300LFQ8TDQ1 290 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 MED8Q96G25 268 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 OSBPL11Q9BXB4 747 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 ILKAPQ9H0C8 392 aaPredicted RBP2.22□□□□□ -2.05
SMC4-205ENST00000465563 CDC42EP4Q9H3Q1 356 aaKnown RBP2.22□□□□□ -2.05
SMC4-205ENST00000465563 CLMPQ9H6B4 373 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 NMRK1Q9NWW6 199 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 RABL2BQ9UNT1 228 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 HEBP2Q9Y5Z4 205 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 DOCK8Q8NF50 2099 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 TRAV39A0A0B4J263 110 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 TRAV40A0A0B4J280 105 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 GOLGA8OA6NCC3 632 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 SPECC1L-ADORA2AF8WAN1 911 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 GOLGA8NF8WBI6 632 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 CD5LO43866 347 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 SOX15O60248 233 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 UTS2O95399 124 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 CISD3P0C7P0 127 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 ZDHHC11BP0C7U3 371 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 MUC1P15941 1255 aaPredicted RBP2.21□□□□□ -2.06
SMC4-205ENST00000465563 SLC26A3P40879 764 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 AQP2P41181 271 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 CXCL5P42830 114 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 NSG1P42857 185 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 TMEM183BQ1AE95 376 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 SPECC1LQ69YQ0 1117 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 DUX4L9Q6RFH8 374 aaPredicted RBP2.21□□□□□ -2.06
SMC4-205ENST00000465563 NANOGNBQ7Z5D8 188 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 TMEM183AQ8IXX5 376 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 ACTRT1Q8TDG2 376 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 GPR151Q8TDV0 419 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 PIBF1Q8WXW3 757 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 ELMO1Q92556 727 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 DUS3LQ96G46 650 aaKnown RBP2.21□□□□□ -2.06
SMC4-205ENST00000465563 MYCBPQ99417 103 aaPredicted RBP2.21□□□□□ -2.06
SMC4-205ENST00000465563 CDX2Q99626 313 aaPredicted RBP2.21□□□□□ -2.06
SMC4-205ENST00000465563 SH3GL3Q99963 347 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 ECSITQ9BQ95 431 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 CCDC77Q9BR77 488 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 OSBPL10Q9BXB5 764 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 ULBP2Q9BZM5 246 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 SLCO1B3Q9NPD5 702 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 PSMC3IPQ9P2W1 217 aaPredicted RBP2.21□□□□□ -2.06
SMC4-205ENST00000465563 DEC1Q9P2X7 70 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 CTNNA3Q9UI47 895 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 GPR179Q6PRD1 2367 aa2.21□□□□□ -2.06
SMC4-205ENST00000465563 HEATR9A2RTY3 570 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 CCDC169A6NNP5 214 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 H3BNH8 94 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 B4GALT5O43286 388 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 CLPXO76031 633 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 ERLIN2O94905 339 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 FGGP02679 453 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 SLC2A5P22732 501 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 IFNA8P32881 189 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 RORCP51449 518 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 SSR4P51571 173 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 CCNHP51946 323 aaPredicted RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 HMGN5P82970 282 aaKnown RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 PON3Q15166 354 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 TTLL9Q3SXZ7 439 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 XKR7Q5GH72 579 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 COA6Q5JTJ3 125 aaKnown RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 C19orf35Q6ZS72 473 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 CNPY4Q8N129 248 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 GTPBP8Q8N3Z3 284 aaPredicted RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 C15orf56Q8N910 161 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 SPATA4Q8NEY3 305 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 OR7G2Q8NG99 324 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 SDR42E1Q8WUS8 393 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 TSSK3Q96PN8 268 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 TAAR1Q96RJ0 339 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 NUP58Q9BVL2 599 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 GABARAPL3Q9BY60 117 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 MRPL37Q9BZE1 423 aaKnown RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 ZNF430Q9H8G1 570 aaPredicted RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 FGF20Q9NP95 211 aaPredicted RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 LSM7Q9UK45 103 aaKnown RBP2.2□□□□□ -2.06
SMC4-205ENST00000465563 NUP50Q9UKX7 468 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 CNTNAP1P78357 1384 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 CARMIL3Q8ND23 1372 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 PLA2R1Q13018 1463 aa2.2□□□□□ -2.06
SMC4-205ENST00000465563 ANKRD12Q6UB98 2062 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 OTOGLQ3ZCN5 2332 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 FAM47DPA6NHR8 397 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 OR2AG2A6NM03 316 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 H0YHG0 523 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 ANGPTL7O43827 346 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 RCBTB2O95199 551 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 PABPC4LP0CB38 370 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms