RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ZNF227Q86WZ6 799 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 GTPBP8Q8N3Z3 284 aaPredicted RBP11.45□□□□□ -0.58
VAPB-203ENST00000463370 Q8N402 240 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 ZBTB8AQ96BR9 441 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 MNTQ99583 582 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 SLC22A13Q9Y226 551 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 NPIPB13A6NJU9 1138 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 NPIPB4C9JG80 1138 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 FAM47E-STBD1D6RA91 191 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 H0YC42 278 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 PLA2G10O15496 165 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 TRAF3IP2O43734 574 aaPredicted RBP11.44□□□□□ -0.58
VAPB-203ENST00000463370 ADH6P28332 368 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 EIF1P41567 113 aaKnown RBP11.44□□□□□ -0.58
VAPB-203ENST00000463370 MFAP5Q13361 173 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 HES3Q5TGS1 186 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 RAET1LQ5VY80 246 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 TIGD3Q6B0B8 471 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 SLC18B1Q6NT16 456 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 ESPNLQ6ZVH7 1005 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 ZNF679Q8IYX0 411 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 ESX1Q8N693 406 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 SUMF1Q8NBK3 374 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 OR1J4Q8NGS1 313 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 PSMF1Q92530 271 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 KIAA1143Q96AT1 154 aaPredicted RBP11.44□□□□□ -0.58
VAPB-203ENST00000463370 C4orf45Q96LM5 186 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 MRPL13Q9BYD1 178 aaKnown RBP11.44□□□□□ -0.58
VAPB-203ENST00000463370 C11orf54Q9H0W9 315 aaPredicted RBP11.44□□□□□ -0.58
VAPB-203ENST00000463370 ZCCHC4Q9H5U6 513 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 CYSLTR2Q9NS75 346 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 FBXL3Q9UKT7 428 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 LOC400499M0QZD8 3231 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 CFAP47Q6ZTR5 3102 aa11.44□□□□□ -0.58
VAPB-203ENST00000463370 RALGAPA1Q6GYQ0 2036 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 IGHV3-15A0A0B4J1V0 119 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 TRBV5-5A0A0J9YX44 114 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 OR2M5A3KFT3 312 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
VAPB-203ENST00000463370 DOK2O60496 412 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 SLC19A2O60779 497 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 HPP00738 406 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 GPR85P60893 370 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 CHAF1BQ13112 559 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 Q499Y3 187 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 CARD17Q5XLA6 110 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 TRILQ7L0X0 811 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 UEVLDQ8IX04 471 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 ZNF676Q8N7Q3 588 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 MIB2Q96AX9 1013 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
VAPB-203ENST00000463370 KLHL13Q9P2N7 655 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 EML6Q6ZMW3 1958 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 TRAV8-7A0A075B6U6 113 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 SULT2B1O00204 365 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 TERTO14746 1132 aaKnown RBP11.43□□□□□ -0.58
VAPB-203ENST00000463370 SEC14L5O43304 696 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 ADRA2CP18825 462 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 DLSTP36957 453 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 RPS15P62841 145 aaKnown RBP11.43□□□□□ -0.58
VAPB-203ENST00000463370 ROM1Q03395 351 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 ACER2Q5QJU3 275 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 HES5Q5TA89 166 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 TMPPEQ6ZT21 453 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 DCXRQ7Z4W1 244 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 LRRC28Q86X40 367 aaPredicted RBP11.43□□□□□ -0.58
VAPB-203ENST00000463370 BEST3Q8N1M1 668 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 ZNF433Q8N7K0 673 aaPredicted RBP11.43□□□□□ -0.58
VAPB-203ENST00000463370 DNAAF1Q8NEP3 725 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 SETD6Q8TBK2 473 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 BRD7Q9NPI1 651 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 GTF2A1LQ9UNN4 478 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 LRP12Q9Y561 859 aa11.43□□□□□ -0.58
VAPB-203ENST00000463370 CCDC187A0A096LP49 1063 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 LOC101059948A0A1B0GTJ6 334 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 PHYHO14832 338 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 LANCL1O43813 399 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 ADRB1P08588 477 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 RFPL3SP0C7P2 107 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 PGA4P0DJD7 388 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 PGA3P0DJD8 388 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 NPR2P20594 1047 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 BLVRAP53004 296 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 DSCR4P56555 118 aaPredicted RBP11.42□□□□□ -0.58
VAPB-203ENST00000463370 CLDN12P56749 244 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 SCN1BQ07699 218 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 TEX30Q5JUR7 227 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 TMEM225Q6GV28 225 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 H3F3CQ6NXT2 135 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 METAP1DQ6UB28 335 aaPredicted RBP11.42□□□□□ -0.58
VAPB-203ENST00000463370 KRT77Q7Z794 578 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 OR52N5Q8NH56 324 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 ST7LQ8TDW4 575 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 RNF128Q8TEB7 428 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 SLC25A43Q8WUT9 341 aaPredicted RBP11.42□□□□□ -0.58
VAPB-203ENST00000463370 ASB17Q8WXJ9 295 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 PARD6AQ9NPB6 346 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 DEPPQ9NTK1 212 aa11.42□□□□□ -0.58
VAPB-203ENST00000463370 DKKL1Q9UK85 242 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms