RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SF3A3Q12874 501 aaKnown RBP eCLIP7.85□□□□□ -1.15
BRCA1-207ENST00000461798 FHL1Q13642 323 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 LRRC23Q53EV4 343 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-207ENST00000461798 ALG10Q5BKT4 473 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 ELFN2Q5R3F8 820 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 FAM120AOSQ5T036 256 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 THEM4Q5T1C6 240 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 FAM27BQ5VT28 67 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 HACD2Q6Y1H2 254 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 OFCC1Q8IZS5 231 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 PAQR4Q8N4S7 273 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-207ENST00000461798 ARIH2OSQ8N7S6 290 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 LRRC75AQ8NAA5 344 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 FAM156AQ8NDB6 213 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 ZNF519Q8TB69 540 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 TMEM158Q8WZ71 300 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 HDAC2Q92769 488 aaKnown RBP7.85□□□□□ -1.15
BRCA1-207ENST00000461798 RDH5Q92781 318 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 NABP1Q96AH0 204 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 BPIFA2Q96DR5 249 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 TPD52L3Q96J77 140 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 SYT3Q9BQG1 590 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 SOX7Q9BT81 388 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 ALG12Q9BV10 488 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 BCL2L14Q9BZR8 327 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 RACGAP1Q9H0H5 632 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 LRMDAQ9H2I8 198 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 RNF121Q9H920 327 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 CHODLQ9H9P2 273 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 EFCAB1Q9HAE3 211 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 MED4Q9NPJ6 270 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 MAN2C1Q9NTJ4 1040 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 NKIRAS2Q9NYR9 191 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 ARMCX1Q9P291 453 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 MYEF2Q9P2K5 600 aaKnown RBP7.85□□□□□ -1.15
BRCA1-207ENST00000461798 DUSP13Q9UII6 198 aa7.85□□□□□ -1.15
BRCA1-207ENST00000461798 MALRD1Q5VYJ5 2156 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.84□□□□□ -1.152e-6■■■■□ 24
BRCA1-207ENST00000461798 IQCMA0A1B0GVH7 501 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 LRP5LA4QPB2 252 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 RNF212BA8MTL3 300 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 LYNX1G3V0Z9 82 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 CXCR6O00574 342 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 NDUFAB1O14561 156 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 PHF1O43189 567 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-207ENST00000461798 ICMTO60725 284 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 PRSS23O95084 383 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 IGHA1P01876 353 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 IFNW1P05000 195 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 LYNX1P0DP58 116 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 IFI30P13284 250 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 MAKP20794 623 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 FUT4P22083 530 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 ACHEP22303 614 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 COL8A2P25067 703 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 ALDH3B1P43353 468 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 SLC9A3P48764 834 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 CDH15P55291 814 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 SELENOVP59797 346 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 RPL27P61353 136 aaKnown RBP7.84□□□□□ -1.15
BRCA1-207ENST00000461798 MYBPC1Q00872 1141 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 TRAM2Q15035 370 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 MOGQ16653 247 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 TBC1D28Q2M2D7 210 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 HSP90B2PQ58FF3 399 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 FAM205BPQ63HN1 556 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 RGS7BPQ6MZT1 257 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-207ENST00000461798 FOXL2NBQ6ZUU3 175 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 TMPRSS11FQ6ZWK6 438 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 CBLL1Q75N03 491 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 VTCN1Q7Z7D3 282 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 NRMQ8IXM6 262 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 C1orf174Q8IYL3 243 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 POU5F2Q8N7G0 328 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 LINC01356Q8N9X3 169 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 RBM15BQ8NDT2 890 aaKnown RBP7.84□□□□□ -1.15
BRCA1-207ENST00000461798 CPEB3Q8NE35 698 aaKnown RBP7.84□□□□□ -1.15
BRCA1-207ENST00000461798 SYNPRQ8TBG9 265 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 ACOT11Q8WXI4 607 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-207ENST00000461798 C11orf40Q8WZ69 217 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 RBP7Q96R05 134 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 WACQ9BTA9 647 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 KCNN2Q9H2S1 579 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 TPK1Q9H3S4 243 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 ANKRD19PQ9H560 264 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 CDH20Q9HBT6 801 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 SLCO1C1Q9NYB5 712 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 GPR160Q9UJ42 338 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 SNX13Q9Y5W8 968 aa7.84□□□□□ -1.15
BRCA1-207ENST00000461798 A0A087WUU8 490 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 IGKV1D-43A0A0B4J1Z2 117 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 A6NIZ1 184 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 C17orf100A8MU93 164 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 NME4O00746 187 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 AHCYL1O43865 530 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 PIP5K1CO60331 668 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 RP2O75695 350 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 SLC2A10O95528 541 aa7.83□□□□□ -1.16
BRCA1-207ENST00000461798 CLPTM1O96005 669 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms