RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 NSMAFQ92636 917 aa19.63■□□□□ 0.73
C9orf3-209ENST00000460573 CIB1Q99828 191 aa19.63■□□□□ 0.73
C9orf3-209ENST00000460573 USE1Q9NZ43 259 aa19.63■□□□□ 0.73
C9orf3-209ENST00000460573 UGT2A1Q9Y4X1 527 aa19.63■□□□□ 0.73
C9orf3-209ENST00000460573 CCDC168Q8NDH2 2452 aa19.63■□□□□ 0.73
C9orf3-209ENST00000460573 A0A1W2PR80 420 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 SEC14L2O76054 403 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 ALKBH2Q6NS38 261 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 SEZ6L2Q6UXD5 910 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 FOXL2NBQ6ZUU3 175 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 NPEPL1Q8NDH3 523 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 SDR9C7Q8NEX9 313 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 NUAK2Q9H093 628 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 RASSF4Q9H2L5 321 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 KCNN2Q9H2S1 579 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 CLEC4MQ9H2X3 399 aaPredicted RBP19.62■□□□□ 0.73
C9orf3-209ENST00000460573 ESRP2Q9H6T0 727 aaKnown RBP19.62■□□□□ 0.73
C9orf3-209ENST00000460573 SLC25A19Q9HC21 320 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 CMC2Q9NRP2 79 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 FKBP7Q9Y680 259 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 POLQO75417 2590 aa19.62■□□□□ 0.73
C9orf3-209ENST00000460573 RIIAD1A6NNX1 92 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 DEFB108AA8MXU0 73 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 UBL3O95164 117 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 CTLA4P16410 223 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 CAPZA2P47755 286 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 ALDH3A2P51648 485 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 ART1P52961 327 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 RIPK1Q13546 671 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 DAG1Q14118 895 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 C3orf36Q3SXR2 165 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 ZNF362Q5T0B9 420 aaPredicted RBP19.61■□□□□ 0.73
C9orf3-209ENST00000460573 FAM27BQ5VT28 67 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 EME1Q96AY2 570 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 DDOQ99489 341 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 WACQ9BTA9 647 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 RACGAP1Q9H0H5 632 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 DCLRE1BQ9H816 532 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 SEC61A2Q9H9S3 476 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 RASSF1Q9NS23 344 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 TMEFF2Q9UIK5 374 aaPredicted RBP19.61■□□□□ 0.73
C9orf3-209ENST00000460573 ORC6Q9Y5N6 252 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 PDZD2O15018 2839 aa19.61■□□□□ 0.73
C9orf3-209ENST00000460573 OR6C68A6NDL8 312 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 MITFO75030 526 aaPredicted RBP19.6■□□□□ 0.73
C9orf3-209ENST00000460573 CTAG2O75638 210 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 ALPLP05186 524 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 ANPEPP15144 967 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 CBR1P16152 277 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 ZNF3P17036 446 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 PTAFRP25105 342 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 LAP3P28838 519 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 ARR3P36575 388 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 RAD23AP54725 363 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 PTGES3Q15185 160 aaKnown RBP19.6■□□□□ 0.73
C9orf3-209ENST00000460573 RCN1Q15293 331 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 SGCAQ16586 387 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 SLC36A2Q495M3 483 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 NCMAPQ5T1S8 102 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 ACSM5Q6NUN0 579 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 TMEM108Q6UXF1 575 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 ZBTB49Q6ZSB9 765 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 SLC16A14Q7RTX9 510 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 ZBTB46Q86UZ6 589 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 GLB1L2Q8IW92 636 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 SKA3Q8IX90 412 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 IQCF1Q8N6M8 205 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 SLC37A3Q8NCC5 494 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 PLPPR2Q96GM1 343 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 PRRG3Q9BZD7 231 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 SRA1Q9HD15 236 aaKnown RBP19.6■□□□□ 0.73
C9orf3-209ENST00000460573 RPRD1BQ9NQG5 326 aaKnown RBP19.6■□□□□ 0.73
C9orf3-209ENST00000460573 B3GNT2Q9NY97 397 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 CRNNQ9UBG3 495 aaPredicted RBP19.6■□□□□ 0.73
C9orf3-209ENST00000460573 FBXL3Q9UKT7 428 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 B9D1Q9UPM9 204 aa19.6■□□□□ 0.73
C9orf3-209ENST00000460573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.59■□□□□ 0.73
C9orf3-209ENST00000460573 A0A1W2PPL8 197 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 EI24O14681 340 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 HRGP04196 525 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 CDAP32320 146 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 NPRL3Q12980 569 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 ETFDHQ16134 617 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 GSG1Q2KHT4 349 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 CBR4Q8N4T8 237 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 OR2T4Q8NH00 348 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 NRGNQ92686 78 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 NABP1Q96AH0 204 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 PIK3IP1Q96FE7 263 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 RERGLQ9H628 205 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 POLE4Q9NR33 117 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 NPAP1Q9NZP6 1156 aa19.59■□□□□ 0.73
C9orf3-209ENST00000460573 COA3Q9Y2R0 106 aaPredicted RBP19.59■□□□□ 0.73
C9orf3-209ENST00000460573 CSMD2Q7Z408 3487 aa19.58■□□□□ 0.73
C9orf3-209ENST00000460573 SIAH2O43255 324 aa19.58■□□□□ 0.72
C9orf3-209ENST00000460573 IGKV3-15P01624 115 aa19.58■□□□□ 0.72
C9orf3-209ENST00000460573 HLA-HP01893 362 aa19.58■□□□□ 0.72
C9orf3-209ENST00000460573 CD79AP11912 226 aa19.58■□□□□ 0.72
C9orf3-209ENST00000460573 MSR1P21757 451 aa19.58■□□□□ 0.72
C9orf3-209ENST00000460573 ZNF83P51522 516 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms