RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MKXQ8IYA7 352 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 FNDC5Q8NAU1 212 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 SDR9C7Q8NEX9 313 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 VN1R2Q8NFZ6 395 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 OR2L3Q8NG85 312 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 OR1L6Q8NGR2 347 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 SMARCD2Q92925 531 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 DCPSQ96C86 337 aaKnown RBP2.19□□□□□ -2.06
RFC4-211ENST00000460408 TUBGCP3Q96CW5 907 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 LRRC58Q96CX6 371 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 RNF185Q96GF1 192 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 PLEKHA8Q96JA3 519 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 TCEANC2Q96MN5 208 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 MS4A4EQ96PG1 132 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 RIOK1Q9BRS2 568 aaKnown RBP2.19□□□□□ -2.06
RFC4-211ENST00000460408 ROGDIQ9GZN7 287 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 GBA3Q9H227 469 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 NT5MQ9NPB1 228 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 CALYQ9NYX4 217 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 SUN2Q9UH99 717 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 SLC25A15Q9Y619 301 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 FER1L6Q2WGJ9 1857 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 ROCK1Q13464 1354 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 ZNF462Q96JM2 2506 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 EYSQ5T1H1 3165 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 CDHR2Q9BYE9 1310 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 DLEC1Q9Y238 1755 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 ZFHX2Q9C0A1 2572 aaPredicted RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 NCOR2Q9Y618 2525 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 MON2Q7Z3U7 1717 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 ZNF292O60281 2723 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PPIAL4EA0A075B759 164 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 C12orf71A8MTZ7 269 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 ERVV-1B6SEH8 477 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 SLC31A2O15432 143 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 KLF8O95600 359 aaPredicted RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 TMEM50AO95807 157 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 SERPINA3P01011 423 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 IGHV2-5P01817 119 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 CT62P0C5K7 136 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PPIAL4FP0DN26 164 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 SSR1P43307 286 aaKnown RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 CRYBB2P43320 205 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 RPS10P46783 165 aaKnown RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 GYG1P46976 350 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 LHX2P50458 406 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 TPMTP51580 245 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 CRISP3P54108 245 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PRMT2P55345 433 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 ERVK-25P63136 954 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PDIA2Q13087 525 aaKnown RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 CAPRIN1Q14444 709 aaKnown RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 IMMTQ16891 758 aaKnown RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 ZNF658BQ4V348 819 aaPredicted RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 TRIM40Q6P9F5 258 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 RUFY3Q7L099 469 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PLA2G4DQ86XP0 818 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 OR4F6Q8NGB9 312 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 SRSF12Q8WXF0 261 aaKnown RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 FBXO32Q969P5 355 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PELOQ9BRX2 385 aaKnown RBP2.18□□□□□ -2.06
RFC4-211ENST00000460408 METTL7AQ9H8H3 244 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 GLRX2Q9NS18 164 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 SLC7A8Q9UHI5 535 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 HPCAL4Q9UM19 191 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 TRAPPC4Q9Y296 219 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 CACNG2Q9Y698 323 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 ZFHX4Q86UP3 3567 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PRUNE2Q8WUY3 3088 aa2.18□□□□□ -2.06
RFC4-211ENST00000460408 PCDH11XQ9BZA7 1347 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 USP42Q9H9J4 1324 aaKnown RBP2.17□□□□□ -2.06
RFC4-211ENST00000460408 RIF1Q5UIP0 2472 aaKnown RBP2.17□□□□□ -2.06
RFC4-211ENST00000460408 CFAP54Q96N23 3096 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 IGHV3-64DA0A0J9YX35 117 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 FAM166BA8MTA8 275 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 MPHOSPH10O00566 681 aaKnown RBP2.17□□□□□ -2.06
RFC4-211ENST00000460408 UPK3AO75631 287 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 UBTFL1P0CB47 393 aaPredicted RBP2.17□□□□□ -2.06
RFC4-211ENST00000460408 SLC2A3P11169 496 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 ABOP16442 354 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 KITLGP21583 273 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 MECOMQ03112 1051 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 REG3AQ06141 175 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 PSG5Q15238 335 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 SGCAQ16586 387 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 RABL6Q3YEC7 729 aaPredicted RBP2.17□□□□□ -2.06
RFC4-211ENST00000460408 LRRC10Q5BKY1 277 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 TMEM255AQ5JRV8 349 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 PRAMEF5Q5TYX0 476 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 PRAMEF6Q5VXH4 476 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 CYB5R2Q6BCY4 276 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 LRRC31Q6UY01 552 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 ZNF621Q6ZSS3 439 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 UTS2BQ765I0 119 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 CDR2LQ86X02 465 aaPredicted RBP2.17□□□□□ -2.06
RFC4-211ENST00000460408 NBPF5PQ86XG9 351 aaPredicted RBP2.17□□□□□ -2.06
RFC4-211ENST00000460408 ZADH2Q8N4Q0 377 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 OR4F15Q8NGB8 312 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 OR10G9Q8NGN4 311 aa2.17□□□□□ -2.06
RFC4-211ENST00000460408 ACER1Q8TDN7 264 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms