RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 SORCS2Q96PQ0 1159 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 V9GYQ6 96 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 ARFGEF3Q5TH69 2177 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 IQCMA0A1B0GVH7 501 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 SLC22A23A1A5C7 686 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 DIRAS1O95057 198 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 SEMG1P04279 462 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 CD14P08571 375 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 CDAP32320 146 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 EVX1P49640 407 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 ERVK-25P63136 954 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 SGCAQ16586 387 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 OR52J3Q8NH60 311 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 DHRS1Q96LJ7 313 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 LRMDAQ9H2I8 198 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 MYOZ1Q9NP98 299 aaPredicted RBP19.84■□□□□ 0.77
PTPN4-208ENST00000460289 CCNB1IP1Q9NPC3 277 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 AURKCQ9UQB9 309 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 UGT2A1Q9Y4X1 527 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 ZANQ9Y493 2812 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 CSPG4Q6UVK1 2322 aa19.84■□□□□ 0.77
PTPN4-208ENST00000460289 TRBV4-1A0A0J9YWV2 114 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 TMEM129A0AVI4 362 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 XKRYO14609 159 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 AHCYL1O43865 530 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 PTP4A3O75365 173 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 NDUFB2O95178 105 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 TP53P04637 393 aaPredicted RBP19.83■□□□□ 0.77
PTPN4-208ENST00000460289 MMP7P09237 267 aaPredicted RBP19.83■□□□□ 0.77
PTPN4-208ENST00000460289 OMPP47874 163 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 TBC1D28Q2M2D7 210 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 IQCCQ4KMZ1 466 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 FAM27BQ5VT28 67 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 ARHGAP24Q8N264 748 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 C10orf105Q8TEF2 133 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 MRPL24Q96A35 216 aaKnown RBP19.83■□□□□ 0.77
PTPN4-208ENST00000460289 NABP1Q96AH0 204 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 CDH20Q9HBT6 801 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 SIGLEC7Q9Y286 467 aa19.83■□□□□ 0.77
PTPN4-208ENST00000460289 IGKV1D-43A0A0B4J1Z2 117 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 NDUFS8O00217 210 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 LY6HO94772 140 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 GADD45GO95257 159 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 FABP3P05413 133 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 LIMS1P48059 325 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 PDLIM4P50479 330 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 PPP2R2BQ00005 443 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 HSF2Q03933 536 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 SEC23BQ15437 767 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 CLDN22Q8N7P3 220 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 DYNLRB1Q9NP97 96 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 IL1RAPQ9NPH3 570 aa19.82■□□□□ 0.76
PTPN4-208ENST00000460289 SH3PXD2BA1X283 911 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 GPRIN2O60269 458 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 SNAP29O95721 258 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 CALB2P22676 271 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 APLNRP35414 380 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 SPIBQ01892 262 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 GPR139Q6DWJ6 353 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 NEU4Q8WWR8 484 aaPredicted RBP19.81■□□□□ 0.76
PTPN4-208ENST00000460289 RSRC1Q96IZ7 334 aaKnown RBP19.81■□□□□ 0.76
PTPN4-208ENST00000460289 ZNF570Q96NI8 536 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 FUZQ9BT04 418 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 MRPL37Q9BZE1 423 aaKnown RBP19.81■□□□□ 0.76
PTPN4-208ENST00000460289 ACTR3BQ9P1U1 418 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 ADAM18Q9Y3Q7 739 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 NSD1Q96L73 2696 aaPredicted RBP19.81■□□□□ 0.76
PTPN4-208ENST00000460289 HIVEP2P31629 2446 aa19.81■□□□□ 0.76
PTPN4-208ENST00000460289 UNC119BA6NIH7 251 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 SYNGR3O43761 229 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 CST2P09228 141 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 ZNF26P17031 533 aaPredicted RBP19.8■□□□□ 0.76
PTPN4-208ENST00000460289 RAD52P43351 418 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 PCBD1P61457 104 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 LOXL1Q08397 574 aaPredicted RBP19.8■□□□□ 0.76
PTPN4-208ENST00000460289 KRTAP21-3Q3LHN1 58 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 PABPC1L2AQ5JQF8 200 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 FOXL2NBQ6ZUU3 175 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 FAM122BQ7Z309 247 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 Q96M85 177 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 GPX7Q96SL4 187 aaPredicted RBP19.8■□□□□ 0.76
PTPN4-208ENST00000460289 MS4A5Q9H3V2 200 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 NRIP3Q9NQ35 241 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 TMCC3Q9ULS5 477 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 TLN2Q9Y4G6 2542 aa19.8■□□□□ 0.76
PTPN4-208ENST00000460289 LOC390937A0A1W2PQ73 354 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 ADRA2AP08913 450 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 CCL2P13500 99 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 ZNF32P17041 273 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 LAP3P28838 519 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 PCSK6P29122 969 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 SDHAP31040 664 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 IFNGR2P38484 337 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 SELENOVP59797 346 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 MTX3Q5HYI7 312 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 RGS7BPQ6MZT1 257 aaPredicted RBP19.79■□□□□ 0.76
PTPN4-208ENST00000460289 DPY19L2P2Q6ZN68 376 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 ALDH16A1Q8IZ83 802 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 PIMREGQ9BSJ6 248 aa19.79■□□□□ 0.76
PTPN4-208ENST00000460289 BCL2L14Q9BZR8 327 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms