RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 TNK1Q13470 666 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 TOP3AQ13472 1001 aaPredicted RBP11.52□□□□□ -0.57
COMMD1-206ENST00000458337 DAG1Q14118 895 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 RAB39AQ14964 217 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 RAB35Q15286 201 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 CLEC12BQ2HXU8 276 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 SLC36A2Q495M3 483 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 GPR139Q6DWJ6 353 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 C1orf94Q6P1W5 598 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 TMEM53Q6P2H8 277 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 PGM2L1Q6PCE3 622 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 THSD4Q6ZMP0 1018 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 DPY19L2P2Q6ZN68 376 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 SLC16A14Q7RTX9 510 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 CLDN22Q8N7P3 220 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 HTRA1Q92743 480 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 ASB9Q96DX5 294 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 FBXO17Q96EF6 278 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 RSRC1Q96IZ7 334 aaKnown RBP11.52□□□□□ -0.57
COMMD1-206ENST00000458337 Q96M85 177 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 DOK1Q99704 481 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 PLK3Q9H4B4 646 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 MAGIXQ9H6Y5 334 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 KRCC1Q9NPI7 259 aaPredicted RBP11.52□□□□□ -0.57
COMMD1-206ENST00000458337 GRHPRQ9UBQ7 328 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 FBXO9Q9UK97 447 aaPredicted RBP11.52□□□□□ -0.57
COMMD1-206ENST00000458337 AURKCQ9UQB9 309 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.57
COMMD1-206ENST00000458337 SLC22A23A1A5C7 686 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 H7C1Q1 480 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 F12P00748 615 aaPredicted RBP11.51□□□□□ -0.57
COMMD1-206ENST00000458337 PTHP01270 115 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 APEHP13798 732 aaKnown RBP11.51□□□□□ -0.57
COMMD1-206ENST00000458337 FPR3P25089 353 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 RRM2P31350 389 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 CDAP32320 146 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 GLRXP35754 106 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 GSSP48637 474 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 EVX1P49640 407 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 SPIBQ01892 262 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 OR10H5Q8NGA6 315 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 SLC7A6OSQ96CW6 309 aaPredicted RBP11.51□□□□□ -0.57
COMMD1-206ENST00000458337 TRIM15Q9C019 465 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 NDEL1Q9GZM8 345 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 C1orf198Q9H425 327 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 GSX1Q9H4S2 264 aaPredicted RBP11.51□□□□□ -0.57
COMMD1-206ENST00000458337 TMCC3Q9ULS5 477 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 SPEF1Q9Y4P9 236 aa11.51□□□□□ -0.57
COMMD1-206ENST00000458337 PRSS37A4D1T9 235 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 IMPA2O14732 288 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 ARPC3O15145 178 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 UBOX5O94941 541 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 SNAP29O95721 258 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 CST2P09228 141 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 SDHAP31040 664 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 IFNGR2P38484 337 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 EFNA4P52798 201 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 DSCR9P59020 149 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 TSPAN31Q12999 210 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 SGCAQ16586 387 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 RFX4Q33E94 735 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 MESTQ5EB52 335 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 ZNF770Q6IQ21 691 aaPredicted RBP11.5□□□□□ -0.57
COMMD1-206ENST00000458337 SMARCD3Q6STE5 483 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 LRRC18Q8N456 261 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 LINC00471Q8N535 108 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
COMMD1-206ENST00000458337 OR4C15Q8NGM1 316 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 GNPDA2Q8TDQ7 276 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 NSMAFQ92636 917 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 CLPTM1LQ96KA5 538 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 SMR3AQ99954 134 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 WACQ9BTA9 647 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 THTPAQ9BU02 230 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 KCNN2Q9H2S1 579 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 RNF121Q9H920 327 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 VSX1Q9NZR4 365 aaPredicted RBP11.5□□□□□ -0.57
COMMD1-206ENST00000458337 IER3IP1Q9Y5U9 82 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 LYVE1Q9Y5Y7 322 aa11.5□□□□□ -0.57
COMMD1-206ENST00000458337 ABCA1O95477 2261 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 FAM171A2A8MVW0 826 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 TNFRSF11BO00300 401 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 XKRYO14609 159 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 SSX4O60224 188 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 OR10H3O60404 316 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 SCG5P05408 212 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 CDKN2AP42771 156 aaKnown RBP11.49□□□□□ -0.57
COMMD1-206ENST00000458337 GUCA1AP43080 201 aaPredicted RBP11.49□□□□□ -0.57
COMMD1-206ENST00000458337 PPOXP50336 477 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 SNRPD2P62316 118 aaKnown RBP11.49□□□□□ -0.57
COMMD1-206ENST00000458337 PLP2Q04941 152 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 SNTB2Q13425 540 aaKnown RBP11.49□□□□□ -0.57
COMMD1-206ENST00000458337 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 PGBD2Q6P3X8 592 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 VHLLQ6RSH7 139 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 SYT9Q86SS6 491 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 SLC30A7Q8NEW0 376 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 OR1J2Q8NGS2 313 aa11.49□□□□□ -0.57
COMMD1-206ENST00000458337 MRPL24Q96A35 216 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms