RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 KLHL24Q6TFL4 600 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 TUBA1AQ71U36 451 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 HIPK1Q86Z02 1210 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 SKA3Q8IX90 412 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 CCDC36Q8IYA8 594 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 LNX2Q8N448 690 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 SLC22A24Q8N4F4 322 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 FAM169BQ8N8A8 192 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 OR4Q3Q8NH05 313 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 FGFBP3Q8TAT2 258 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 PIK3IP1Q96FE7 263 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 PLPPR2Q96GM1 343 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 ZNF75AQ96N20 296 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 PKP2Q99959 881 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 TMEM204Q9BSN7 226 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 TSSK6Q9BXA6 273 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 SEMA6AQ9H2E6 1030 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 PLEKHF2Q9H8W4 249 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 S100A14Q9HCY8 104 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 NGBQ9NPG2 151 aa8.77□□□□□ -1.01
ATG4A-206ENST00000457035 CRNNQ9UBG3 495 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-206ENST00000457035 OTOGQ6ZRI0 2925 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 OR6C68A6NDL8 312 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 DCTN6O00399 190 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 MGRN1O60291 552 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 PLAUP00749 431 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 IGKV3-15P01624 115 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SCG5P05408 212 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 OR8G3PP0DMU2 310 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 NR2C1P13056 603 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 OSMP13725 252 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 CBR1P16152 277 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 CTLA4P16410 223 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 CDAP32320 146 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 GIPRP48546 466 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 ZNF83P51522 516 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 ZNF84P51523 738 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 NR1H2P55055 460 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 UBE2NP61088 152 aaKnown RBP8.76□□□□□ -1.01
ATG4A-206ENST00000457035 MRPS34P82930 218 aaKnown RBP8.76□□□□□ -1.01
ATG4A-206ENST00000457035 BSPH1Q075Z2 132 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SLC36A3Q495N2 470 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SLC35F1Q5T1Q4 408 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 FAM27BQ5VT28 67 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 KDM4DQ6B0I6 523 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 FOXL2NBQ6ZUU3 175 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 ADCK1Q86TW2 530 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 CDC20BQ86Y33 519 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 ZDHHC13Q8IUH4 622 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SVOPLQ8N434 492 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 ATG16L2Q8NAA4 619 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 NPEPL1Q8NDH3 523 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 OR52L1Q8NGH7 329 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 OR4K13Q8NH42 304 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 NSMAFQ92636 917 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 HTRA1Q92743 480 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 NABP1Q96AH0 204 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 TSSK2Q96PF2 358 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SNX18Q96RF0 628 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 NMNAT3Q96T66 252 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SH3GL3Q99963 347 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 NUAK2Q9H093 628 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 GABARAPL1Q9H0R8 117 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SYT4Q9H2B2 425 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 CLEC4MQ9H2X3 399 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-206ENST00000457035 ESRP2Q9H6T0 727 aaKnown RBP8.76□□□□□ -1.01
ATG4A-206ENST00000457035 ZNF556Q9HAH1 456 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 SIAEQ9HAT2 523 aa8.76□□□□□ -1.01
ATG4A-206ENST00000457035 PRRC2AP48634 2157 aaKnown RBP8.76□□□□□ -1.01
ATG4A-206ENST00000457035 MAP1AP78559 2803 aaPredicted RBP8.75□□□□□ -1.01
ATG4A-206ENST00000457035 SLC16A7O60669 478 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 IGLV1-44P01699 117 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 HLA-HP01893 362 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 PATE4P0C8F1 98 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 ZNF23P17027 643 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 NPR2P20594 1047 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 PTAFRP25105 342 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 CD40P25942 277 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 NOS3P29474 1203 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 HOXC12P31275 282 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 CDK5Q00535 292 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 PIGFQ07326 219 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.75□□□□□ -1.01
ATG4A-206ENST00000457035 DBPQ10586 325 aaPredicted RBP8.75□□□□□ -1.01
ATG4A-206ENST00000457035 C3orf36Q3SXR2 165 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 ACSM5Q6NUN0 579 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 LEG1Q6P5S2 330 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 MDP1Q86V88 176 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 TMEM200AQ86VY9 491 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 OR6V1Q8N148 313 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 PARP8Q8N3A8 854 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 OR2T33Q8NG76 320 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 OR52E2Q8NGJ4 325 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 LILRB1Q8NHL6 650 aaPredicted RBP8.75□□□□□ -1.01
ATG4A-206ENST00000457035 DNAJC9Q8WXX5 260 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 NOX3Q9HBY0 568 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 SRA1Q9HD15 236 aaKnown RBP8.75□□□□□ -1.01
ATG4A-206ENST00000457035 TBC1D23Q9NUY8 699 aa8.75□□□□□ -1.01
ATG4A-206ENST00000457035 TMEFF2Q9UIK5 374 aaPredicted RBP8.75□□□□□ -1.01
ATG4A-206ENST00000457035 OAZ3Q9UMX2 235 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms