RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CDAP32320 146 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 NR4A2P43354 598 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 RAP1BP61224 184 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 RAP1AP62834 184 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 SGCAQ16586 387 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 TBC1D28Q2M2D7 210 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 PGAM4Q8N0Y7 254 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 ZNF519Q8TB69 540 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 FOXN4Q96NZ1 517 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 LRRC37BQ96QE4 947 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 TSPAN32Q96QS1 320 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 SYT3Q9BQG1 590 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 NDEL1Q9GZM8 345 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 LRMDAQ9H2I8 198 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 GORASP2Q9H8Y8 452 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 NDUFAF4Q9P032 175 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 TAGLN3Q9UI15 199 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 A0A1W2PRQ8 180 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 A8MV72 311 aaPredicted RBP18.26■□□□□ 0.51
HMGB3-205ENST00000455596 CDC42EP2O14613 210 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 DCTN3O75935 186 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 SNAP29O95721 258 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 MMP7P09237 267 aaPredicted RBP18.26■□□□□ 0.51
HMGB3-205ENST00000455596 CCL2P13500 99 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 DAOP14920 347 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 RPL4P36578 427 aaKnown RBP18.26■□□□□ 0.51
HMGB3-205ENST00000455596 HSF2Q03933 536 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 DGCR6Q14129 220 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 GGTLC2Q14390 218 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 ZBED5Q49AG3 693 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 PODNL1Q6PEZ8 512 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 PIGWQ7Z7B1 504 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 FAM156AQ8NDB6 213 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 ZNF540Q8NDQ6 660 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 SLC7A13Q8TCU3 470 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 NABP1Q96AH0 204 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 TPK1Q9H3S4 243 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 MS4A5Q9H3V2 200 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 MAGEL2Q9UJ55 1249 aa18.26■□□□□ 0.51
HMGB3-205ENST00000455596 STAMBPO95630 424 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 IGFBP1P08833 259 aaPredicted RBP18.25■□□□□ 0.51
HMGB3-205ENST00000455596 FAM157BP0CG42 384 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 HSD17B1P14061 328 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 APLNRP35414 380 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 GUCA1AP43080 201 aaPredicted RBP18.25■□□□□ 0.51
HMGB3-205ENST00000455596 KRT72Q14CN4 511 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 FGD3Q5JSP0 725 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 C6orf52Q5T4I8 152 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 RGS7BPQ6MZT1 257 aaPredicted RBP18.25■□□□□ 0.51
HMGB3-205ENST00000455596 PRIMA1Q86XR5 153 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 PAQR4Q8N4S7 273 aaPredicted RBP18.25■□□□□ 0.51
HMGB3-205ENST00000455596 FAM86B1Q8N7N1 296 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 CLDN22Q8N7P3 220 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 ARIH2OSQ8N7S6 290 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 FAM46AQ96IP4 442 aaKnown RBP18.25■□□□□ 0.51
HMGB3-205ENST00000455596 C7orf34Q96L11 122 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 ARL8BQ9NVJ2 186 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 GRHPRQ9UBQ7 328 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 REV1Q9UBZ9 1251 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 DUSP13Q9UII6 198 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 FZR1Q9UM11 496 aa18.25■□□□□ 0.51
HMGB3-205ENST00000455596 ZNF32P17041 273 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 ITGA2P17301 1181 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 APEX1P27695 318 aaKnown RBP18.24■□□□□ 0.51
HMGB3-205ENST00000455596 ERVK-25P63136 954 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 IQCCQ4KMZ1 466 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 PABPC1L2AQ5JQF8 200 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 SAMD4BQ5PRF9 694 aaKnown RBP18.24■□□□□ 0.51
HMGB3-205ENST00000455596 FAM27BQ5VT28 67 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 CYB5R2Q6BCY4 276 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 LRP11Q86VZ4 500 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 UBASH3BQ8TF42 649 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 BPESC1Q9GZL8 116 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 OR51B6Q9H340 312 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 KRCC1Q9NPI7 259 aaPredicted RBP18.24■□□□□ 0.51
HMGB3-205ENST00000455596 NDE1Q9NXR1 346 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 V9GYQ6 96 aa18.24■□□□□ 0.51
HMGB3-205ENST00000455596 A0A1W2PPW3 197 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 LCKP06239 509 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 CD14P08571 375 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 IGHV4-31P0DP07 118 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 RAD52P43351 418 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 ALDH3B1P43353 468 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 MXRA7P84157 204 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 C16orf89Q6UX73 402 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 ZNF786Q8N393 782 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 CPEB3Q8NE35 698 aaKnown RBP18.23■□□□□ 0.51
HMGB3-205ENST00000455596 PYURFQ96I23 114 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 CDRT15Q96T59 188 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 BCL2L14Q9BZR8 327 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 MYEF2Q9P2K5 600 aaKnown RBP18.23■□□□□ 0.51
HMGB3-205ENST00000455596 CD300AQ9UGN4 299 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 AURKCQ9UQB9 309 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 ADAM18Q9Y3Q7 739 aa18.23■□□□□ 0.51
HMGB3-205ENST00000455596 A0A1W2PPL8 197 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 XKRYO14609 159 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 DIRAS1O95057 198 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 NDUFB2O95178 105 aa18.22■□□□□ 0.51
HMGB3-205ENST00000455596 APEHP13798 732 aaKnown RBP18.22■□□□□ 0.51
HMGB3-205ENST00000455596 ZNF26P17031 533 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms