RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 SORDQ00796 357 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 FAM27E3Q08E93 113 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 GABRA6Q16445 453 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 ANKRD16Q6P6B7 361 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 IZUMO2Q6UXV1 221 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 TCEANCQ8N8B7 351 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 STEAP2Q8NFT2 490 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 OR1K1Q8NGR3 316 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 FAM81AQ8TBF8 368 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 TSSK2Q96PF2 358 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 FOXB1Q99853 325 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 APOL4Q9BPW4 351 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 HINT3Q9NQE9 182 aaKnown RBP10.17□□□□□ -0.78
SCN9A-204ENST00000452182 TMEM38BQ9NVV0 291 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 IMPAD1Q9NX62 359 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 MOKQ9UQ07 419 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 UGT2A1Q9Y4X1 527 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 KLF2Q9Y5W3 355 aaPredicted RBP10.17□□□□□ -0.78
SCN9A-204ENST00000452182 CACNA1CQ13936 2221 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 FAM183AA6NL82 134 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 TLX2O43763 284 aaPredicted RBP10.16□□□□□ -0.78
SCN9A-204ENST00000452182 LYZL6O75951 148 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 RNF224P0DH78 156 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 SPI1P17947 270 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 PEX19P40855 299 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 BLVRAP53004 296 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 SNRPGP62308 76 aaKnown RBP10.16□□□□□ -0.78
SCN9A-204ENST00000452182 ARF1P84077 181 aaKnown RBP10.16□□□□□ -0.78
SCN9A-204ENST00000452182 GLO1Q04760 184 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 ETFDHQ16134 617 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 AADACL4Q5VUY2 407 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF691Q5VV52 312 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 NXNL2Q5VZ03 156 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 PLBD1Q6P4A8 553 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 USP51Q70EK9 711 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 CXXC5Q7LFL8 322 aaKnown RBP10.16□□□□□ -0.78
SCN9A-204ENST00000452182 SSX8Q7RTT4 187 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 P2RY8Q86VZ1 359 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 CPOQ8IVL8 374 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 GLB1L2Q8IW92 636 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 CCDC36Q8IYA8 594 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 CYGBQ8WWM9 190 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 NSMAFQ92636 917 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 BCL2L2Q92843 193 aaPredicted RBP10.16□□□□□ -0.78
SCN9A-204ENST00000452182 HCAR1Q9BXC0 346 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 SRA1Q9HD15 236 aaKnown RBP10.16□□□□□ -0.78
SCN9A-204ENST00000452182 HSPE1-MOB4S4R3N1 261 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 DOPEY1Q5JWR5 2465 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 ADGRG4Q8IZF6 3080 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 USP9XQ93008 2570 aaPredicted RBP10.16□□□□□ -0.78
SCN9A-204ENST00000452182 TENM4Q6N022 2769 aa10.16□□□□□ -0.78
SCN9A-204ENST00000452182 CIB4A0PJX0 185 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 HRGP04196 525 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 PPP3CBP16298 524 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 GABRB1P18505 474 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 SLC2A5P22732 501 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 IL32P24001 234 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 LAP3P28838 519 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 CCKARP32238 428 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 GUCA1AP43080 201 aaPredicted RBP10.15□□□□□ -0.78
SCN9A-204ENST00000452182 KCNMB1Q16558 191 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 SLC35D3Q5M8T2 416 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 TIMM23BQ5SRD1 257 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 FAM27BQ5VT28 67 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 MEDAGQ5VYS4 303 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF813Q6ZN06 617 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 BHLHA15Q7RTS1 189 aaPredicted RBP10.15□□□□□ -0.78
SCN9A-204ENST00000452182 SLC22A24Q8N4F4 322 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 SETD9Q8NE22 299 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 PROKR2Q8NFJ6 384 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 OR9Q1Q8NGQ5 310 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 RHOXF1Q8NHV9 184 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 NABP1Q96AH0 204 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 NELFAQ9H3P2 528 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 SIAEQ9HAT2 523 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 OBP2BQ9NPH6 170 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF226Q9NYT6 803 aa10.15□□□□□ -0.78
SCN9A-204ENST00000452182 COA3Q9Y2R0 106 aaPredicted RBP10.15□□□□□ -0.78
SCN9A-204ENST00000452182 ARPC4-TTLL3A0A0A6YYG9 625 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 OR5H1A6NKK0 313 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 M0R129 80 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 RAD51DO75771 328 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 GLCEO94923 617 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 FARS2O95363 451 aaKnown RBP10.15□□□□□ -0.79
SCN9A-204ENST00000452182 OR8G3PP0DMU2 310 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 GAAP10253 952 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 B4GALT1P15291 398 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 PAX7P23759 505 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 HSF2Q03933 536 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 OCLNQ16625 522 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 TBRG1Q3YBR2 411 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 LINC01590Q5TEZ4 76 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 C9orf135Q5VTT2 229 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 DPPA2Q7Z7J5 298 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 GID4Q8IVV7 300 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 ENTHD1Q8IYW4 607 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 SLC26A10Q8NG04 563 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 IL4I1Q96RQ9 567 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF184Q99676 751 aaPredicted RBP10.15□□□□□ -0.79
SCN9A-204ENST00000452182 WACQ9BTA9 647 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms