RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 USF1P22415 310 aaPredicted RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 APLNRP35414 380 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 NR4A2P43354 598 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 RPS23P62266 143 aaKnown RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 VLDLRP98155 873 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 SPIBQ01892 262 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 PLP2Q04941 152 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 LOXL1Q08397 574 aaPredicted RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 NKPD1Q17RQ9 610 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 KRTAP21-3Q3LHN1 58 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 PABPC1L2AQ5JQF8 200 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 SPATA46Q5T0L3 261 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 C10orf128Q5T292 105 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 OTPQ5XKR4 325 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 RGS7BPQ6MZT1 257 aaPredicted RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 PODNL1Q6PEZ8 512 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 MBOAT2Q6ZWT7 520 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 TSEN54Q7Z6J9 526 aaKnown RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 LIPHQ8WWY8 451 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 NABP1Q96AH0 204 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 RASD2Q96D21 266 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 ZNF570Q96NI8 536 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 KCNK17Q96T54 332 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 DOK1Q99704 481 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 NMNAT1Q9HAN9 279 aaPredicted RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 STX18Q9P2W9 335 aaKnown RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 SAMD4AQ9UPU9 718 aaKnown RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 AURKCQ9UQB9 309 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 FAM32AQ9Y421 112 aaKnown RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 UGT2A1Q9Y4X1 527 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 TEX13CA0A0J9YWL9 993 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 TRBV4-1A0A0J9YWV2 114 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 LOC390937A0A1W2PQ73 354 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 LRP5LA4QPB2 252 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 VWC2LB2RUY7 222 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 XKRYO14609 159 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 IMPA2O14732 288 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 ARPC2O15144 300 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 SYNGR3O43761 229 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 TLX2O43763 284 aaPredicted RBP8.32□□□□□ -1.08
USP54-207ENST00000451492 CRLF1O75462 422 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 STAMBPO95630 424 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 IGHMP01871 453 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 IGFBP1P08833 259 aaPredicted RBP8.32□□□□□ -1.08
USP54-207ENST00000451492 NR2C1P13056 603 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 LAP3P28838 519 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 GLRXP35754 106 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 MRPS34P82930 218 aaKnown RBP8.32□□□□□ -1.08
USP54-207ENST00000451492 FHL1Q13642 323 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 CCNIQ14094 377 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 KRT72Q14CN4 511 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 TRIP10Q15642 601 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 FXNQ16595 210 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 ZBED5Q49AG3 693 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 MESTQ5EB52 335 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 SLC25A47Q6Q0C1 308 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 DEFB107AQ8IZN7 70 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 LRRC75AQ8NAA5 344 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 OR1J1Q8NGS3 322 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 ZNF519Q8TB69 540 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 SLC7A13Q8TCU3 470 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 GTF3AQ92664 365 aaKnown RBP8.32□□□□□ -1.08
USP54-207ENST00000451492 RSRC1Q96IZ7 334 aaKnown RBP8.32□□□□□ -1.08
USP54-207ENST00000451492 Q96M85 177 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 RBP7Q96R05 134 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 SNX18Q96RF0 628 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 CDRT15Q96T59 188 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 SEPHS2Q99611 448 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 EMC7Q9NPA0 242 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 DCAF13Q9NV06 445 aaKnown RBP8.32□□□□□ -1.08
USP54-207ENST00000451492 TAAR3PQ9P1P4 343 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 GRHPRQ9UBQ7 328 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 REV1Q9UBZ9 1251 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 TAGLN3Q9UI15 199 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 MAGEL2Q9UJ55 1249 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 TMEM5Q9Y2B1 443 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 ARL2BPQ9Y2Y0 163 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 HIVEP2P31629 2446 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 ABCA1O95477 2261 aa8.32□□□□□ -1.08
USP54-207ENST00000451492 TANC2Q9HCD6 1990 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 ABCA2Q9BZC7 2435 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 MALRD1Q5VYJ5 2156 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 C5orf49A4QMS7 147 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 A6NIZ1 184 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 NPIPB13A6NJU9 1138 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 CENPBD1B2RD01 187 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 NPIPB4C9JG80 1138 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 NDUFS8O00217 210 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 SOCS2O14508 198 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 TPD52L2O43399 206 aaKnown RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 MGRN1O60291 552 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 DCTN3O75935 186 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 NCR1O76036 304 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 PTHP01270 115 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 HPXP02790 462 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 MMP7P09237 267 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 ZNF26P17031 533 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 RHCEP18577 417 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 STOMP27105 288 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 IL2RGP31785 369 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms