RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 SMURF2Q9HAU4 748 aa18.86■□□□□ 0.61
CPSF7-208ENST00000450000 MED4Q9NPJ6 270 aa18.86■□□□□ 0.61
CPSF7-208ENST00000450000 CMTM6Q9NX76 183 aa18.86■□□□□ 0.61
CPSF7-208ENST00000450000 RHCGQ9UBD6 479 aa18.86■□□□□ 0.61
CPSF7-208ENST00000450000 NPIPB13A6NJU9 1138 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 EFCAB9A8MZ26 197 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 NPIPB4C9JG80 1138 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 PHF1O43189 567 aaPredicted RBP18.85■□□□□ 0.61
CPSF7-208ENST00000450000 TPD52L2O43399 206 aaKnown RBP18.85■□□□□ 0.61
CPSF7-208ENST00000450000 UCP2P55851 309 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 CTXN1P60606 82 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 MRPS34P82930 218 aaKnown RBP18.85■□□□□ 0.61
CPSF7-208ENST00000450000 MSMPQ1L6U9 139 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 IFI44LQ53G44 452 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 C10orf128Q5T292 105 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 ARMC4Q5T2S8 1044 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 FAM205BPQ63HN1 556 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 ZNF730Q6ZMV8 503 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 IL17RELQ6ZVW7 336 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 OAFQ86UD1 273 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 ALDH16A1Q8IZ83 802 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 ZNF519Q8TB69 540 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 FAM162AQ96A26 154 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 ALG12Q9BV10 488 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 A4GNTQ9UNA3 340 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 HIF3AQ9Y2N7 669 aa18.85■□□□□ 0.61
CPSF7-208ENST00000450000 A6NIZ1 184 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 LILRA1O75019 489 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 GMNNO75496 209 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 SNAP29O95721 258 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 PCMT1P22061 227 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 ACHEP22303 614 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 GCH1P30793 250 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 CDAP32320 146 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 SRP14P37108 136 aaKnown RBP18.84■□□□□ 0.61
CPSF7-208ENST00000450000 MDH1P40925 334 aaKnown RBP18.84■□□□□ 0.61
CPSF7-208ENST00000450000 SLC7A2P52569 658 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 RAP1BP61224 184 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 RPL27P61353 136 aaKnown RBP18.84■□□□□ 0.61
CPSF7-208ENST00000450000 RAP1AP62834 184 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 RIN1Q13671 783 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 CCNIQ14094 377 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 ANKDD1AQ495B1 522 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 PABPC1L2AQ5JQF8 200 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 THEM4Q5T1C6 240 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 VTCN1Q7Z7D3 282 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 NRMQ8IXM6 262 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 SLC15A3Q8IY34 581 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 OR1J1Q8NGS3 322 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 OR51A7Q8NH64 312 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 HDAC2Q92769 488 aaKnown RBP18.84■□□□□ 0.61
CPSF7-208ENST00000450000 SEPHS2Q99611 448 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 ZNF416Q9BWM5 594 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 HINT3Q9NQE9 182 aaKnown RBP18.84■□□□□ 0.61
CPSF7-208ENST00000450000 ZNF446Q9NWS9 450 aa18.84■□□□□ 0.61
CPSF7-208ENST00000450000 MYEF2Q9P2K5 600 aaKnown RBP18.84■□□□□ 0.61
CPSF7-208ENST00000450000 PPIHO43447 177 aaKnown RBP18.83■□□□□ 0.6
CPSF7-208ENST00000450000 HPXP02790 462 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 STOMP27105 288 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 RPL4P36578 427 aaKnown RBP18.83■□□□□ 0.6
CPSF7-208ENST00000450000 GDI2P50395 445 aaKnown RBP18.83■□□□□ 0.6
CPSF7-208ENST00000450000 PCBD1P61457 104 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 TRIP10Q15642 601 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 CR1LQ2VPA4 569 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 PCGF3Q3KNV8 242 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 IGFN1Q86VF2 1251 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 RNF113BQ8IZP6 322 aaKnown RBP18.83■□□□□ 0.6
CPSF7-208ENST00000450000 OFCC1Q8IZS5 231 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 PAQR4Q8N4S7 273 aaPredicted RBP18.83■□□□□ 0.6
CPSF7-208ENST00000450000 NARFLQ9H6Q4 476 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 DECR2Q9NUI1 292 aa18.83■□□□□ 0.6
CPSF7-208ENST00000450000 FAM32AQ9Y421 112 aaKnown RBP18.83■□□□□ 0.6
CPSF7-208ENST00000450000 ANK3Q12955 4377 aaKnown RBP18.83■□□□□ 0.6
CPSF7-208ENST00000450000 TRAV27A0A087WT01 109 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 A0A1W2PPL8 197 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 SERPINA1P01009 418 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 IGFBP1P08833 259 aaPredicted RBP18.82■□□□□ 0.6
CPSF7-208ENST00000450000 ZNF32P17041 273 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 COL8A2P25067 703 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 SLC9A3P48764 834 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 NUDT2P50583 147 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 ZNF133P52736 654 aaPredicted RBP18.82■□□□□ 0.6
CPSF7-208ENST00000450000 TMEM33P57088 247 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 TEKQ02763 1124 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 FMODQ06828 376 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 ELFN2Q5R3F8 820 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 ACOT11Q8WXI4 607 aaPredicted RBP18.82■□□□□ 0.6
CPSF7-208ENST00000450000 KCTD14Q9BQ13 255 aaPredicted RBP18.82■□□□□ 0.6
CPSF7-208ENST00000450000 GRHPRQ9UBQ7 328 aa18.82■□□□□ 0.6
CPSF7-208ENST00000450000 TMEFF2Q9UIK5 374 aaPredicted RBP18.82■□□□□ 0.6
CPSF7-208ENST00000450000 C5orf49A4QMS7 147 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 C17orf100A8MU93 164 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 J3KTA2 159 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 XKRYO14609 159 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 CLPTM1O96005 669 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 TSPAN19P0C672 248 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 ZNF250P15622 560 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 ERVK-25P63136 954 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 PRKCDQ05655 676 aa18.81■□□□□ 0.6
CPSF7-208ENST00000450000 ZNF718Q3SXZ3 478 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms