RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 KLK2P20151 261 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 SOX2P48431 317 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 OR2B6P58173 313 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 EIF2B1Q14232 305 aaKnown RBP15.6■□□□□ 0.09
SMC6-206ENST00000446852 HSPB2Q16082 182 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 TMEM176BQ3YBM2 270 aaPredicted RBP15.6■□□□□ 0.09
SMC6-206ENST00000446852 TRIQKQ629K1 86 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 FAM205BPQ63HN1 556 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 ADPRHL1Q8NDY3 354 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 LIN37Q96GY3 246 aaPredicted RBP15.6■□□□□ 0.09
SMC6-206ENST00000446852 DCBLD2Q96PD2 775 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 HPF1Q9NWY4 346 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 FOXJ2Q9P0K8 574 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 ANKRD61A6NGH8 418 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 CENPBD1B2RD01 187 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 H3BSH0 61 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 RAMP1O60894 148 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 PNPP00491 289 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 CD63P08962 238 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 LIFP15018 202 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 DPP4P27487 766 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 RBMS1P29558 406 aaKnown RBP15.6■□□□□ 0.09
SMC6-206ENST00000446852 CDCP2Q5VXM1 449 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 SLC22A10Q63ZE4 541 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 FDX2Q6P4F2 183 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 UBE2J2Q8N2K1 259 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 GTPBP8Q8N3Z3 284 aaPredicted RBP15.6■□□□□ 0.09
SMC6-206ENST00000446852 ZNF676Q8N7Q3 588 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 SLC25A43Q8WUT9 341 aaPredicted RBP15.6■□□□□ 0.09
SMC6-206ENST00000446852 BRD7Q9NPI1 651 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 KLHL13Q9P2N7 655 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 CLEC4AQ9UMR7 237 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 KNTC1P50748 2209 aa15.6■□□□□ 0.09
SMC6-206ENST00000446852 TRABD2BA6NFA1 517 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 TMEM212A6NML5 194 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 ZNF254O75437 659 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 TALDO1P37837 337 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 CD97P48960 835 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 OR7E24Q6IFN5 339 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 DNM1P34Q6PK57 102 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 RNF128Q8TEB7 428 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 KCNJ15Q99712 375 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 MRPL13Q9BYD1 178 aaKnown RBP15.59■□□□□ 0.09
SMC6-206ENST00000446852 SLC22A4Q9H015 551 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 ABRACLQ9P1F3 81 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 FARSAQ9Y285 508 aaKnown RBP15.59■□□□□ 0.09
SMC6-206ENST00000446852 TRAF3IP2O43734 574 aaPredicted RBP15.59■□□□□ 0.09
SMC6-206ENST00000446852 RAB40ALP0C0E4 278 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 MFGE8Q08431 387 aaPredicted RBP15.59■□□□□ 0.09
SMC6-206ENST00000446852 RASGEF1BQ0VAM2 473 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 TEX30Q5JUR7 227 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 B3GNTL1Q67FW5 361 aaPredicted RBP15.59■□□□□ 0.09
SMC6-206ENST00000446852 GPAT4Q86UL3 456 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 UEVLDQ8IX04 471 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 DND1Q8IYX4 353 aaKnown RBP15.59■□□□□ 0.09
SMC6-206ENST00000446852 ZNF433Q8N7K0 673 aaPredicted RBP15.59■□□□□ 0.09
SMC6-206ENST00000446852 OR52N5Q8NH56 324 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 LGALS14Q8TCE9 139 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 COMMD4Q9H0A8 199 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMC6-206ENST00000446852 SACM1LQ9NTJ5 587 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 LRP12Q9Y561 859 aa15.59■□□□□ 0.09
SMC6-206ENST00000446852 A0A087WZY1 265 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 ADRA2CP18825 462 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 CHAF1BQ13112 559 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 SSPNQ14714 243 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 PCK2Q16822 640 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 HES5Q5TA89 166 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 KCTD18Q6PI47 426 aaPredicted RBP15.58■□□□□ 0.09
SMC6-206ENST00000446852 STAC2Q6ZMT1 411 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 KRT77Q7Z794 578 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 LINC00346Q8IVM7 164 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 ZNF454Q8N9F8 522 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 HPS1Q92902 700 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 PPP1R14AQ96A00 147 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 JSRP1Q96MG2 331 aaPredicted RBP15.58■□□□□ 0.09
SMC6-206ENST00000446852 ABHD1Q96SE0 405 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 SLC22A13Q9Y226 551 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 HDGFL3Q9Y3E1 203 aa15.58■□□□□ 0.09
SMC6-206ENST00000446852 IFITM5A6NNB3 132 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 ZIC3O60481 467 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 MAPK3P27361 379 aaPredicted RBP15.58■□□□□ 0.08
SMC6-206ENST00000446852 PITPNBP48739 271 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 C19orf18Q8NEA5 215 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 OR1J4Q8NGS1 313 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 ST7LQ8TDW4 575 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 MIB2Q96AX9 1013 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 EDEM2Q9BV94 578 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 MMP28Q9H239 520 aa15.58■□□□□ 0.08
SMC6-206ENST00000446852 TRAV8-7A0A075B6U6 113 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 TRBV5-7A0A0A0MS05 114 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 A0A0G2JMM0 328 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 A0A1W2PPB8 328 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 A0A1W2PRS3 328 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 KIR3DP1A8MWS1 328 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 AIPO00170 330 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 PDCD5O14737 125 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 LANCL1O43813 399 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 SLC43A1O75387 559 aa15.57■□□□□ 0.08
SMC6-206ENST00000446852 KHDRBS3O75525 346 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms