RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 MTORP42345 2549 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 IGKV1D-43A0A0B4J1Z2 117 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 UNC119BA6NIH7 251 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 XKRYO14609 159 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 SSX4O60224 188 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 KRT36O76013 467 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 ATP6V1B2P21281 511 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 RRM2P31350 389 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 CDAP32320 146 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 IFNGR2P38484 337 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 GUCA1AP43080 201 aaPredicted RBP16.1■□□□□ 0.17
CCDC188-202ENST00000444532 EFNA4P52798 201 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 DSCR9P59020 149 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 GALK2Q01415 458 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 PLP2Q04941 152 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 SNTB2Q13425 540 aaKnown RBP16.1■□□□□ 0.17
CCDC188-202ENST00000444532 SGCAQ16586 387 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 FAM27BQ5VT28 67 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 GPR139Q6DWJ6 353 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 LCN8Q6JVE9 175 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 KRT80Q6KB66 452 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 FAM122BQ7Z309 247 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 ZNF584Q8IVC4 421 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 HTRA1Q92743 480 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 NABP1Q96AH0 204 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 NRIP3Q9NQ35 241 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 CMAHPQ9Y471 501 aa16.1■□□□□ 0.17
CCDC188-202ENST00000444532 SMAD7O15105 426 aaKnown RBP16.09■□□□□ 0.17
CCDC188-202ENST00000444532 F12P00748 615 aaPredicted RBP16.09■□□□□ 0.17
CCDC188-202ENST00000444532 MMP7P09237 267 aaPredicted RBP16.09■□□□□ 0.17
CCDC188-202ENST00000444532 SDHAP31040 664 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 GLRXP35754 106 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 HMGA2P52926 109 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 CLEC9AQ6UXN8 241 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 DPY19L2P2Q6ZN68 376 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 ZER1Q7Z7L7 766 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 CLDN22Q8N7P3 220 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 SLC30A7Q8NEW0 376 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 OR1J2Q8NGS2 313 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 Q96M85 177 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 ZNF570Q96NI8 536 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 SMR3AQ99954 134 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 RHNO1Q9BSD3 238 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 MAGIXQ9H6Y5 334 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 CCNB1IP1Q9NPC3 277 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 SLC7A8Q9UHI5 535 aa16.09■□□□□ 0.17
CCDC188-202ENST00000444532 IQCMA0A1B0GVH7 501 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 TCRBV5S2A0A599 114 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 SLC22A23A1A5C7 686 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 PRSS37A4D1T9 235 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 OR10H3O60404 316 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 MAGEA2P43356 314 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 EVX1P49640 407 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 PPOXP50336 477 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 FXYD6P3P58550 94 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 RPS23P62266 143 aaKnown RBP16.08■□□□□ 0.16
CCDC188-202ENST00000444532 MS4A2Q01362 244 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 SMARCD3Q6STE5 483 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 THSD4Q6ZMP0 1018 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 FOXL2NBQ6ZUU3 175 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 ASB9Q96DX5 294 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 DOK1Q99704 481 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 GPA33Q99795 319 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 REG4Q9BYZ8 158 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 LRMDAQ9H2I8 198 aa16.08■□□□□ 0.16
CCDC188-202ENST00000444532 TMEM129A0AVI4 362 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 STAMBPO95630 424 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 SNAP29O95721 258 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 CST2P09228 141 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 FPR3P25089 353 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 RPS6KA3P51812 740 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 PCBD1P61457 104 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 HSF2Q03933 536 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 TBC1D28Q2M2D7 210 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 MESTQ5EB52 335 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 C1orf94Q6P1W5 598 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 CLEC2AQ6UVW9 174 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 ADCK1Q86TW2 530 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 LINC00471Q8N535 108 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 OR10H5Q8NGA6 315 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 CDH20Q9HBT6 801 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 IER3IP1Q9Y5U9 82 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 FKBP7Q9Y680 259 aa16.07■□□□□ 0.16
CCDC188-202ENST00000444532 SETD2Q9BYW2 2564 aaPredicted RBP16.07■□□□□ 0.16
CCDC188-202ENST00000444532 TEX13CA0A0J9YWL9 993 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 A0A1W2PPL8 197 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 RNF223E7ERA6 249 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 H7C1C5 153 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 LY6G6DO95868 133 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 TXNDC12O95881 172 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 HEXAP06865 529 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 CSF3P09919 207 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 APEHP13798 732 aaKnown RBP16.06■□□□□ 0.16
CCDC188-202ENST00000444532 LAP3P28838 519 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 GSSP48637 474 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 LCN6P62502 163 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 TRAP1Q12931 704 aaKnown RBP16.06■□□□□ 0.16
CCDC188-202ENST00000444532 TSPAN31Q12999 210 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 KRR1Q13601 381 aaKnown RBP16.06■□□□□ 0.16
CCDC188-202ENST00000444532 RFX4Q33E94 735 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms