RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 LRRC61Q9BV99 259 aa17.12■□□□□ 0.33
PAXBP1-204ENST00000443785 GPN1Q9HCN4 374 aaPredicted RBP17.12■□□□□ 0.33
PAXBP1-204ENST00000443785 UBQLN4Q9NRR5 601 aa17.12■□□□□ 0.33
PAXBP1-204ENST00000443785 RENP00797 406 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 AMY2AP04746 511 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 SEC61A1P61619 476 aaKnown RBP17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 ASPHD2Q6ICH7 369 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 OR52W1Q6IF63 320 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 IDO2Q6ZQW0 420 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 GVQW1Q8N7I0 195 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 CHST4Q8NCG5 386 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 PTPMT1Q8WUK0 201 aaPredicted RBP17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 SLC25A12O75746 678 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 PLATP00750 562 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 RPS4XP62701 263 aaKnown RBP17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 GFOD2Q3B7J2 385 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 ATRAIDQ6UW56 229 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 RHOUQ7L0Q8 258 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 WDFY1Q8IWB7 410 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 GPBAR1Q8TDU6 330 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 PRR13Q9NZ81 148 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 AKAP7Q9P0M2 348 aaPredicted RBP17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 STEAP1Q9UHE8 339 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 VDAC3Q9Y277 283 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 PLEKHA6Q9Y2H5 1048 aa17.11■□□□□ 0.33
PAXBP1-204ENST00000443785 SLC6A19Q695T7 634 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 TMPRSS9Q7Z410 1059 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 CDC20BQ86Y33 519 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 KLHL15Q96M94 604 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 OPN4Q9UHM6 478 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 COA3Q9Y2R0 106 aaPredicted RBP17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 hCG_1807616A0A1W2PRN6 198 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 CDK2AP1O14519 115 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 NMBP08949 121 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 TAF13Q15543 124 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 FAM69BQ5VUD6 431 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 HACD4Q5VWC8 232 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 TMEM81Q6P7N7 255 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 FBXO46Q6PJ61 603 aaPredicted RBP17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 RNF144BQ7Z419 303 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 CMIPQ8IY22 773 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 ZSCAN1Q8NBB4 408 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 MED29Q9NX70 200 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 GPR160Q9UJ42 338 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 HIF3AQ9Y2N7 669 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 KCNMB2Q9Y691 235 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 DENND4AQ7Z401 1863 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 SLC2A1P11166 492 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 IL12BP29460 328 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 PRSS3P35030 304 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 EIF2B1Q14232 305 aaKnown RBP17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 OR2AK2Q8NG84 335 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 SLC25A28Q96A46 364 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 C7orf50Q9BRJ6 194 aaKnown RBP17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 TBL1XR1Q9BZK7 514 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 MFFQ9GZY8 342 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 C12orf4Q9NQ89 552 aa17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 MRPS18BQ9Y676 258 aaKnown RBP17.1■□□□□ 0.33
PAXBP1-204ENST00000443785 PHF3Q92576 2039 aaKnown RBP17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 PCP4L1A6NKN8 68 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 F5H5P2 479 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 H3BML4 177 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 CTDSPLO15194 276 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 S100A11P31949 105 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 NUDT1P36639 197 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 NUP62P37198 522 aaPredicted RBP17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 NSDHLQ15738 373 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 RSPO4Q2I0M5 234 aaPredicted RBP17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 SEZ6L2Q6UXD5 910 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 LANCL3Q6ZV70 420 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 SPERTQ8NA61 448 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 OR1J4Q8NGS1 313 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 OR1J2Q8NGS2 313 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 MRPL48Q96GC5 212 aaKnown RBP17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 C4orf45Q96LM5 186 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 PDCD10Q9BUL8 212 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 DIABLOQ9NR28 239 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 CLEC1BQ9P126 229 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 SPTY2D1-AS1A0A0U1RR47 76 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 RP2O75695 350 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 ASAH2BP0C7U1 165 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 GNALP38405 381 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 RAB11BQ15907 218 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 STEAP1BQ6NZ63 245 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 LRRC75AQ8NAA5 344 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 SLC25A44Q96H78 314 aaPredicted RBP17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 ZNF75AQ96N20 296 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 NUDT9Q9BW91 350 aa17.09■□□□□ 0.33
PAXBP1-204ENST00000443785 RAB40ALP0C0E4 278 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 PPP3CBP16298 524 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 DMWDQ09019 674 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 RBMS2Q15434 407 aaKnown RBP17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 NHLRC3Q5JS37 347 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 SLC35D3Q5M8T2 416 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 TSSK4Q6SA08 328 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 KCTD9Q7L273 389 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 RAB40AQ8WXH6 277 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 TTC9Q92623 222 aa17.08■□□□□ 0.33
PAXBP1-204ENST00000443785 DHDHQ9UQ10 334 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms