RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 GLO1Q04760 184 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 GABRA6Q16445 453 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 SGCAQ16586 387 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 SLC25A30Q5SVS4 291 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 ZNF691Q5VV52 312 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 NXNL2Q5VZ03 156 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 CLEC18BQ6UXF7 455 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 ZNF813Q6ZN06 617 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 FOXL2NBQ6ZUU3 175 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 ZNF627Q7L945 461 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 GLB1L2Q8IW92 636 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 C8orf59Q8N0T1 100 aaPredicted RBP13.86□□□□□ -0.19
USP40-206ENST00000443711 CLEC18CQ8NCF0 446 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 OR1K1Q8NGR3 316 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 RHOXF1Q8NHV9 184 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 BCL2L2Q92843 193 aaPredicted RBP13.86□□□□□ -0.19
USP40-206ENST00000443711 BOD1Q96IK1 185 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 MUS81Q96NY9 551 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 ZNF184Q99676 751 aaPredicted RBP13.86□□□□□ -0.19
USP40-206ENST00000443711 USB1Q9BQ65 265 aaKnown RBP13.86□□□□□ -0.19
USP40-206ENST00000443711 OR10A4Q9H209 315 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 OR51V1Q9H2C8 321 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 TMEM38BQ9NVV0 291 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 HSPE1-MOB4S4R3N1 261 aa13.86□□□□□ -0.19
USP40-206ENST00000443711 FAM171A2A8MVW0 826 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 RAD51DO75771 328 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 GLCEO94923 617 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 FARS2O95363 451 aaKnown RBP13.85□□□□□ -0.19
USP40-206ENST00000443711 GYPBP06028 91 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 OR8G3PP0DMU2 310 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 CLUP10909 449 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
USP40-206ENST00000443711 B4GALT1P15291 398 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 FMO3P31513 532 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 CDAP32320 146 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 UGT2B10P36537 528 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 RPS7P62081 194 aaKnown RBP13.85□□□□□ -0.19
USP40-206ENST00000443711 IL5RAQ01344 420 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 APOFQ13790 326 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 TSC22D1Q15714 1073 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 OCLNQ16625 522 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 NRN1LQ496H8 165 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 KLHL12Q53G59 568 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 SLC35D3Q5M8T2 416 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 AADACL4Q5VUY2 407 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 MEDAGQ5VYS4 303 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 USP51Q70EK9 711 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 GID4Q8IVV7 300 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 ENTHD1Q8IYW4 607 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 BBS1Q8NFJ9 593 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 Q96MT0 163 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 SIAEQ9HAT2 523 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 RASSF1Q9NS23 344 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 CLN6Q9NWW5 311 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 RAB26Q9ULW5 256 aa13.85□□□□□ -0.19
USP40-206ENST00000443711 USP9XQ93008 2570 aaPredicted RBP13.84□□□□□ -0.19
USP40-206ENST00000443711 SEC14L2O76054 403 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 HLA-DQA2P01906 255 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 GNAO1P09471 354 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 GABRB1P18505 474 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 MSR1P21757 451 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 SLC2A5P22732 501 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 HSF2Q03933 536 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 TFF3Q07654 80 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 DBPQ10586 325 aaPredicted RBP13.84□□□□□ -0.19
USP40-206ENST00000443711 MAD2L1BPQ15013 274 aaPredicted RBP13.84□□□□□ -0.19
USP40-206ENST00000443711 KCNMB1Q16558 191 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 LCN1P1Q5VSP4 162 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 MEPCEQ7L2J0 689 aaKnown RBP13.84□□□□□ -0.19
USP40-206ENST00000443711 BCDIN3DQ7Z5W3 292 aaKnown RBP13.84□□□□□ -0.19
USP40-206ENST00000443711 P2RY8Q86VZ1 359 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 CCDC36Q8IYA8 594 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 C17orf78Q8N4C9 275 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 SLC22A24Q8N4F4 322 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 OR51L1Q8NGJ5 315 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 ZNRF4Q8WWF5 429 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 RFKQ969G6 155 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 ZNF582Q96NG8 517 aaPredicted RBP13.84□□□□□ -0.19
USP40-206ENST00000443711 FOXN4Q96NZ1 517 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 TEAD3Q99594 435 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 KCNN2Q9H2S1 579 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 NELFAQ9H3P2 528 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 POLE4Q9NR33 117 aa13.84□□□□□ -0.19
USP40-206ENST00000443711 DOPEY1Q5JWR5 2465 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 A0A096LPE4 126 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 A0A1W2PPZ6 126 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 SLC22A31A6NKX4 558 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 SNTNA6NMZ2 147 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 HRGP04196 525 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 PPP3CBP16298 524 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 HOXC12P31275 282 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 UBE2NP61088 152 aaKnown RBP13.83□□□□□ -0.2
USP40-206ENST00000443711 ISL1P61371 349 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 SORDQ00796 357 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 TEKQ02763 1124 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 TBRG1Q3YBR2 411 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 HIKESHIQ53FT3 197 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 C1QTNF12Q5T7M4 302 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 LINC01590Q5TEZ4 76 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 FAM27BQ5VT28 67 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms