RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 NKAIN4Q8IVV8 208 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 FNDC8Q8TC99 324 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 C1orf159Q96HA4 380 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 TPD52L3Q96J77 140 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 NDEL1Q9GZM8 345 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 SIAEQ9HAT2 523 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 SMURF2Q9HAU4 748 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 LPAR2Q9HBW0 351 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 METRNQ9UJH8 293 aa10.09□□□□□ -0.79
TTC28-203ENST00000442232 PLSCR5A0PG75 271 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 HTR3EA5X5Y0 456 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 FAM220BPB1ANY3 271 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 NCR1O76036 304 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 SLC2A10O95528 541 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 CLPTM1O96005 669 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 MSMBP08118 114 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 ANPEPP15144 967 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 ZNF250P15622 560 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 STOMP27105 288 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 MAGEB1P43366 347 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 OR1E2P47887 323 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 GDI2P50395 445 aaKnown RBP10.08□□□□□ -0.8
TTC28-203ENST00000442232 GZMMP51124 257 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 CCL8P80075 99 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 MRPS34P82930 218 aaKnown RBP10.08□□□□□ -0.8
TTC28-203ENST00000442232 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
TTC28-203ENST00000442232 GLO1Q04760 184 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 ST3GAL3Q11203 375 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 KLF10Q13118 480 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 ALG10Q5BKT4 473 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 FAM205BPQ63HN1 556 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 ALDH16A1Q8IZ83 802 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 PAQR4Q8N4S7 273 aaPredicted RBP10.08□□□□□ -0.8
TTC28-203ENST00000442232 CPEB3Q8NE35 698 aaKnown RBP10.08□□□□□ -0.8
TTC28-203ENST00000442232 OR2T12Q8NG77 320 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 OR1J1Q8NGS3 322 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 MOSPD2Q8NHP6 518 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 NSMAFQ92636 917 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 TMEM186Q96B77 213 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 RAB39BQ96DA2 213 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 TIMD4Q96H15 378 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 PRRC1Q96M27 445 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 RBP7Q96R05 134 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 MRPL13Q9BYD1 178 aaKnown RBP10.08□□□□□ -0.8
TTC28-203ENST00000442232 TXNIPQ9H3M7 391 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 OCEL1Q9H607 264 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 SAP30LQ9HAJ7 183 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 C20orf141Q9NUB4 165 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 HIF1ANQ9NWT6 349 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 AP3M1Q9Y2T2 418 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 CAPN7Q9Y6W3 813 aa10.08□□□□□ -0.8
TTC28-203ENST00000442232 ANK2Q01484 3957 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 SVEP1Q4LDE5 3571 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 IGLV3-9A0A075B6K5 115 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 TRAV20A0A0B4J274 112 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 IGHV1-69-2A0A0G2JMI3 117 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ELOVL7A1L3X0 281 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 C5orf49A4QMS7 147 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 CLDN25C9JDP6 229 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 FXYD1O00168 92 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 CDC14BO60729 498 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 GAAP10253 952 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 IFI30P13284 250 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ZNF81P51508 661 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 CRYBA2P53672 197 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 PCBD1P61457 104 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ERVS71-1P61550 626 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 RUNX1T1Q06455 604 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 HFEQ30201 348 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ZNF718Q3SXZ3 478 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 PABPC1L2AQ5JQF8 200 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 FAM209AQ5JX71 171 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ARL9Q6T311 187 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ARPINQ7Z6K5 226 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 C1orf174Q8IYL3 243 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 C10orf82Q8WW14 230 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ELMOD3Q96FG2 381 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 SEPHS2Q99611 448 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 ALG12Q9BV10 488 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 METTL17Q9H7H0 456 aaPredicted RBP10.07□□□□□ -0.8
TTC28-203ENST00000442232 ZNF665Q9H7R5 613 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 FGFR1OP2Q9NVK5 253 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 NKIRAS2Q9NYR9 191 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 HIF3AQ9Y2N7 669 aa10.07□□□□□ -0.8
TTC28-203ENST00000442232 A0A1W2PPL8 197 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 A6NIZ1 184 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 FAM157AC9JC47 383 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 GSTA4O15217 222 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 PIP5K1CO60331 668 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 IFNW1P05000 195 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 MMP7P09237 267 aaPredicted RBP10.06□□□□□ -0.8
TTC28-203ENST00000442232 ZNF32P17041 273 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 ITGA2P17301 1181 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 CDAP32320 146 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 KDELR2P33947 212 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 CRYBB2P43320 205 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 ARHGDIAP52565 204 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 ZNF133P52736 654 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms